Genome Details
Selected Rep_genome_ID: A89.CMAG_1
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus mucosae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A89.CMAG_1 | 2,225,623 | 99.18% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR026994 | 1,974,182 | 98.82% | 0% | China | Asia | CGMR |
| DM171_106 | 2,137,754 | 99.18% | 0% | NA | Africa | H3AfricaPhase2 |
| Rep_1030 | 2,056,596 | 97.2826% | 0% | NA | NA | WIS |
| SPMP09_bin.17 | 2,056,711 | 95.61% | 0.54% | Singapore | Asia | SPMP |
| SPMP15_bin.6 | 1,993,467 | 98.23% | 0% | Singapore | Asia | SPMP |
| SPMP33_bin.80 | 1,923,892 | 90.76% | 0% | Singapore | Asia | SPMP |
| SPMP65_bin.43 | 1,889,571 | 96.95% | 0.27% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A89.CMAG_1_CGC13 | CGCFAM_00004 | Yes | 13 | 5 | alpha-glucan |
| A89.CMAG_1_CGC16 | CGCFAM_00102 | Yes | 7 | 2 | |
| A89.CMAG_1_CGC21 | CGCFAM_00255 | Yes | 7 | 2 | |
| A89.CMAG_1_CGC28 | CGCFAM_00456 | Yes | 7 | 2 | |
| A89.CMAG_1_CGC26 | CGCFAM_00769 | Yes | 7 | 2 | |
| A89.CMAG_1_CGC1 | CGCFAM_01085 | Yes | 3 | 1 | |
| A89.CMAG_1_CGC4 | CGCFAM_01274 | Yes | 4 | 2 | |
| A89.CMAG_1_CGC2 | CGCFAM_02442 | Yes | 3 | 1 | |
| A89.CMAG_1_CGC25 | CGCFAM_02443 | Yes | 3 | 1 | |
| A89.CMAG_1_CGC17 | CGCFAM_04478 | Yes | 3 | 1 | |
| A89.CMAG_1_CGC7 | CGCFAM_04480 | Yes | 4 | 1 | |
| A89.CMAG_1_CGC8 | CGCFAM_04481 | Yes | 3 | 1 | |
| A89.CMAG_1_CGC11 | CGCFAM_06825 | Yes | 5 | 1 | |
| A89.CMAG_1_CGC12 | CGCFAM_06826 | Yes | 5 | 2 | |
| A89.CMAG_1_CGC18 | CGCFAM_06827 | Yes | 7 | 1 | |
| A89.CMAG_1_CGC24 | CGCFAM_06828 | Yes | 12 | 1 | |
| A89.CMAG_1_CGC3 | CGCFAM_06829 | Yes | 5 | 3 |
Top CAZyme Families