Cluster: A89.CMAG_1_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: A89.CMAG_1
- CGC Family ID: CGCFAM_06828
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A89_contig_798 | A89_contig_798_1786 | 1943301 | 1944848 | - | 3.A.1.120.2 |
| pfam | A89_contig_798 | A89_contig_798_1787 | 1945017 | 1945526 | + | Flavodoxin_2 | FMN_red |
| CAZyme | A89_contig_798 | A89_contig_798_1788 | 1945613 | 1946800 | + | CBM50 |
| pfam | A89_contig_798 | A89_contig_798_1789 | 1946895 | 1947332 | - | NifU_N |
| pfam | A89_contig_798 | A89_contig_798_1790 | 1947313 | 1948542 | - | Aminotran_5 |
| TC | A89_contig_798 | A89_contig_798_1791 | 1948893 | 1949885 | + | 3.A.1.34.1 |
| TC | A89_contig_798 | A89_contig_798_1792 | 1949882 | 1950781 | + | 3.A.1.34.1 |
| TC | A89_contig_798 | A89_contig_798_1793 | 1950774 | 1951538 | + | 3.A.1.34.1 |
| TC | A89_contig_798 | A89_contig_798_1794 | 1951599 | 1952468 | - | 8.A.5.1.4 |
| TC | A89_contig_798 | A89_contig_798_1795 | 1952610 | 1953938 | - | 2.A.66.1.13 |
| TC | A89_contig_798 | A89_contig_798_1796 | 1954206 | 1955435 | + | 1.A.11.1.4 |
| TC | A89_contig_798 | A89_contig_798_1797 | 1955549 | 1956907 | - | 2.A.1.7.5 |
Gene ID: A89_contig_798_1786
Type: TC
Location: 1943301 - 1944848 (-)
Type: TC
Location: 1943301 - 1944848 (-)
Gene ID: A89_contig_798_1787
Type: pfam
Location: 1945017 - 1945526 (+)
Type: pfam
Location: 1945017 - 1945526 (+)
Gene ID: A89_contig_798_1788
Type: CAZyme
Location: 1945613 - 1946800 (+)
Type: CAZyme
Location: 1945613 - 1946800 (+)
Gene ID: A89_contig_798_1789
Type: pfam
Location: 1946895 - 1947332 (-)
Type: pfam
Location: 1946895 - 1947332 (-)
Gene ID: A89_contig_798_1790
Type: pfam
Location: 1947313 - 1948542 (-)
Type: pfam
Location: 1947313 - 1948542 (-)
Gene ID: A89_contig_798_1791
Type: TC
Location: 1948893 - 1949885 (+)
Type: TC
Location: 1948893 - 1949885 (+)
Gene ID: A89_contig_798_1792
Type: TC
Location: 1949882 - 1950781 (+)
Type: TC
Location: 1949882 - 1950781 (+)
Gene ID: A89_contig_798_1793
Type: TC
Location: 1950774 - 1951538 (+)
Type: TC
Location: 1950774 - 1951538 (+)
Gene ID: A89_contig_798_1794
Type: TC
Location: 1951599 - 1952468 (-)
Type: TC
Location: 1951599 - 1952468 (-)
Gene ID: A89_contig_798_1795
Type: TC
Location: 1952610 - 1953938 (-)
Type: TC
Location: 1952610 - 1953938 (-)
Gene ID: A89_contig_798_1796
Type: TC
Location: 1954206 - 1955435 (+)
Type: TC
Location: 1954206 - 1955435 (+)
Gene ID: A89_contig_798_1797
Type: TC
Location: 1955549 - 1956907 (-)
Type: TC
Location: 1955549 - 1956907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus mucosae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.