Differentially Abundant CAZymes in CGCs
Total: 24804 entries| CAZyme Gene ID ↓ | CGC ID | CAZyme Family | Study | Condition Pair | log2FC | FDR P-value | Continent | CGC Family ID | Substrate |
|---|---|---|---|---|---|---|---|---|---|
| HRGMv2_0258_17_15 | HRGMv2_0258_CGC67 | GT2 | IBD (Lloyd-Price et al., 2019) | UC > CD | 12.92457 | 0.04801 | Europe | CGCFAM_00151 | |
| HRGMv2_0258_17_15 | HRGMv2_0258_CGC67 | GT2 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 14.34994 | 0.00224 | Europe | CGCFAM_00151 | |
| HRGMv2_0258_15_37 | HRGMv2_0258_CGC64 | GT4 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 13.98541 | 0.00224 | Europe | CGCFAM_04760 | |
| HRGMv2_0258_15_37 | HRGMv2_0258_CGC64 | GT4 | IBD (Lloyd-Price et al., 2019) | nonIBD > UC | 2.99115 | 0.00230 | Europe | CGCFAM_04760 | |
| HRGMv2_0258_15_37 | HRGMv2_0258_CGC64 | GT4 | IBD (Lloyd-Price et al., 2019) | UC > CD | 10.99426 | 0.04801 | Europe | CGCFAM_04760 | |
| HRGMv2_0258_12_28 | HRGMv2_0258_CGC59 | GH109 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.55026 | 0.04801 | Europe | CGCFAM_00001 | Pectin Galactan Beta-glucan Xylan Beta-mannan Host glycan |
| HRGMv2_0258_12_28 | HRGMv2_0258_CGC59 | GH109 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 1.24747 | 0.00224 | Europe | CGCFAM_00001 | Pectin Galactan Beta-glucan Xylan Beta-mannan Host glycan |
| HRGMv2_0258_11_72 | HRGMv2_0258_CGC56 | GH3 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 1.81556 | 0.01710 | Europe | NA | |
| HRGMv2_0258_11_72 | HRGMv2_0258_CGC56 | GH3 | Diet (De Filippis et al., 2019) | vegetarian > omnivore | 1.22330 | 0.01449 | Europe | NA | |
| HRGMv2_0258_11_53 | HRGMv2_0258_CGC55 | GH106 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 14.56348 | 0.00224 | Europe | CGCFAM_08892 |