Differentially Abundant CAZymes in CGCs
Total: 24804 entries| CAZyme Gene ID ↑ | CGC ID | CAZyme Family | Study | Condition Pair | log2FC | FDR P-value | Continent | CGC Family ID | Substrate |
|---|---|---|---|---|---|---|---|---|---|
| HRGMv2_0258_7_70 | HRGMv2_0258_CGC36 | GH2 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 1.76191 | 0.00224 | Europe | CGCFAM_01472 | |
| HRGMv2_0258_8_202 | HRGMv2_0258_CGC41 | GH2 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 4.41214 | 0.00224 | Europe | CGCFAM_00083 | Beta-glucan |
| HRGMv2_0258_8_202 | HRGMv2_0258_CGC41 | GH2 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.59721 | 0.04801 | Europe | CGCFAM_00083 | Beta-glucan |
| HRGMv2_0258_8_202 | HRGMv2_0258_CGC41 | GH2 | IBD (Lloyd-Price et al., 2019) | nonIBD > UC | 2.81494 | 0.00230 | Europe | CGCFAM_00083 | Beta-glucan |
| HRGMv2_0258_9_71 | HRGMv2_0258_CGC44 | GH29 | IBD (Lloyd-Price et al., 2019) | nonIBD > UC | 3.13300 | 0.00230 | Europe | CGCFAM_00001 | Pectin Galactan Beta-glucan Xylan Beta-mannan Host glycan |
| HRGMv2_0258_9_71 | HRGMv2_0258_CGC44 | GH29 | IBD (Lloyd-Price et al., 2019) | nonIBD > CD | 14.42346 | 0.00224 | Europe | CGCFAM_00001 | Pectin Galactan Beta-glucan Xylan Beta-mannan Host glycan |
| HRGMv2_0258_9_71 | HRGMv2_0258_CGC44 | GH29 | IBD (Lloyd-Price et al., 2019) | UC > CD | 11.29046 | 0.04801 | Europe | CGCFAM_00001 | Pectin Galactan Beta-glucan Xylan Beta-mannan Host glycan |
| HRGMv2_0265_12_26 | HRGMv2_0265_CGC20 | GH13 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.11881 | 0.01057 | Asia | NA | |
| HRGMv2_0265_3_30 | HRGMv2_0265_CGC8 | GH57 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 1.15104 | 0.03196 | Asia | CGCFAM_01244 | Pectin |
| HRGMv2_0265_9_10 | HRGMv2_0265_CGC13 | GH179 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 1.11680 | 0.03196 | Asia | CGCFAM_00630 |