dbCAN Logo

Cluster: ShaoY_2019_ERR3406243_bin.1_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_17 18454 19230 + GT25
pfam ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_18 19350 21314 + Sulfatase
STP ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_19 21359 23032 + PIG-L
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_20 23035 24030 + GT2
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_21 24089 24847 + GT2
pfam ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_22 24911 26935 + Sulfatase
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_23 27006 28070 + GT4
pfam ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_24 28075 29016 + DUF535
pfam ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_25 29038 30261 + Wzy_C
TC ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_26 30432 31865 + 9.B.18.1.2
NULL(UNKNOWN) ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_27 31891 32907 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_28 32943 34130 + GT4
NULL(UNKNOWN) ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_29 34176 35588 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_30 35632 36777 + GT4
CAZyme ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_31 36764 37735 + GT2
pfam ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_32 37775 38704 + Choline_kinase | APH | EcKL
TC ShaoY_2019_ERR3406243_bin.1_k141_6018 ShaoY_2019_ERR3406243_bin.1_k141_6018_33 38706 39605 + 2.A.7.18.1
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_17
Type: CAZyme
Location: 18454 - 19230 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_18
Type: pfam
Location: 19350 - 21314 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_19
Type: STP
Location: 21359 - 23032 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_20
Type: CAZyme
Location: 23035 - 24030 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_21
Type: CAZyme
Location: 24089 - 24847 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_22
Type: pfam
Location: 24911 - 26935 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_23
Type: CAZyme
Location: 27006 - 28070 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_24
Type: pfam
Location: 28075 - 29016 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_25
Type: pfam
Location: 29038 - 30261 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_26
Type: TC
Location: 30432 - 31865 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_27
Type:
Location: 31891 - 32907 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_28
Type: CAZyme
Location: 32943 - 34130 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_29
Type:
Location: 34176 - 35588 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_30
Type: CAZyme
Location: 35632 - 36777 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_31
Type: CAZyme
Location: 36764 - 37735 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_32
Type: pfam
Location: 37775 - 38704 (+)
Gene ID: ShaoY_2019_ERR3406243_bin.1_k141_6018_33
Type: TC
Location: 38706 - 39605 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Veillonellaceae
→
Genus
Veillonella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List