PROTEIN: ShaoY_2019_ERR3406243_bin.1_k141_6018_27
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406243_bin.1_k141_6018_27.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406243_bin.1_k141_6018_27
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Protein Sequence
MKFITCASYY GVGSSAVTDY VSEFSSIFSF TNEEFRFIQD PDGISDLEFN LVECFNRHNS 60 GHSLKRYKKL VDFYNGNFLF PRYQSFFGNK WKELSYQYIQ ELTDFTYPGW WFYDLYDRGE 120 FYLFRKRFIN KLLHKTIWKN QPDRVFNTMK DEITYCSHPS EEKFLQCTKN YIYRLFESVK 180 PKNIDTIMVD QLVPPMNLSR YLRYFDNNIK VVVVDRDPRD IFFLDKYVWK DGILPSNVET 240 FCKWFRYTRS HRKHETMNSE HIKFVQFEDL VYKYDDTTND LREWLVLDET QHSSKLKFFN 300 PSISIHNTQV WKQFSHEIKE KEFIERELSE YLYDFPMI 338
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5RJQ0-F1-model_v4 | 1 | 338 | 60 | 400 | 0.5051 |
0.5673 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZW9-F1-model_v4 | GT4 | 1 | 334 | 3 | 326 | 0.5082 |
0.5441 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZW9 | GT4 | 1 | 334 | 3 | 326 | 0.5082 |
0.5441 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5RJQ0-F1-model_v4 | 1 | 338 | 60 | 400 | 0.5051 |
0.5673 |