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PROTEIN: ShaoY_2019_ERR3406243_bin.1_k141_6018_29

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Protein File & Metadata
Download PDB File
Source:
ShaoY_2019_ERR3406243_bin.1_k141_6018_29.pdb
Genome ID:
ShaoY_2019_ERR3406243_bin.1
Protein ID:
ShaoY_2019_ERR3406243_bin.1_k141_6018_29

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Detailed structural information will appear here after analysis...

Protein Sequence 
MILSKILKNI   SYSISANLVS   LLISIFMIII   APKYLTSDEY   GLWQLFLFYF   YYMGFSHLGW 60
REGIYLRYAG   KYFDQLDANV   FSGQLYGFIV   LQLVVLIVII   GILHIVVSDP   IKQLALICAV 120
LLAPFVNYSN   LCYSVLQTTN   RIQSYARLLM   IENGLFLGGL   VIFLFGFQLY   QFQYMYYAKV 180
LSLVVVTIIS   IYLCRRLLVP   SFGSLAQILT   EAKKNILVGS   QLMVAYLAGM   LILGVVRYGI 240
SIGWDVTTFG   KVSLSLSISN   FLIAFISAIS   IVFFPILKRM   NEENRIHVYK   PIRLGLDCIL 300
LGLLLLYYPL   QLILSWWLPQ   YMDSLLYLSV   LFPICLFDSK   LHILVNTYFK   SMRKETLMLK 360
LNVLIVLLSV   LTTIFTVYVF   HNLNLTVFSV   IVIYAIQCCL   AEYCISSLIK   IDLKKNMLVD 420
LVMCSIFVIS   AWSIHSAWCM   VIYGIAYIVF   LFTHRKSLRN   LITSIKEIQT 470
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8CWT9-F1-model_v4 1 470 1 469 0.8644 0.8842
AF-A0A1A6Z3M2-F1-model_v4 1 467 6 472 0.8354 0.8637
AF-P71616-F1-model_v4 1 411 6 434 0.7737 0.8678
AF-K0F8P9-F1-model_v4 7 411 1 392 0.7711 0.8613
AF-A0A0H3GP79-F1-model_v4 1 411 6 446 0.7686 0.8778
AF-Q32FA7-F1-model_v4 1 411 6 446 0.7677 0.8766
AF-P37340-F1-model_v4 1 411 6 446 0.7672 0.8762
AF-P45272-F1-model_v4 1 411 11 451 0.7669 0.8818
AF-A0A0H3GGV5-F1-model_v4 1 411 5 433 0.7662 0.8592
AF-Q8DPQ6-F1-model_v4 1 411 9 444 0.7661 0.8712
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WBL35586.1 GT4 1 469 231 796 0.643 0.819
AF-F2NKF2-F1-model_v4 GT4 1 470 2 498 0.6132 0.8116
A0A1S9M4N4 GT2 1 412 223 692 0.6066 0.833
AF-F9ZKY1-F1-model_v4 GT2 1 470 31 521 0.596 0.7753
AF-A0A517Z2I8-F1-model_v4 GT2 1 470 10 498 0.5764 0.7561
AF-A0A3S9PQD0-F1-model_v4 GT4 1 468 16 572 0.5623 0.7359
B1FZW0 GT2 1 412 2 427 0.559 0.7668
AF-A0A5Q0NSF2-F1-model_v4 GT2 1 470 6 848 0.5461 0.7158
AF-A0A2R2WB60-F1-model_v4 GT2 1 469 25 972 0.5395 0.7473
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WBL35586.1 GT4 1 469 231 796 0.643 0.819
F2NKF2 GT4 1 470 2 498 0.6132 0.8116
A0A1S9M4N4 GT2 1 412 223 692 0.6066 0.833
F9ZKY1 GT2 1 470 31 521 0.596 0.7753
A0A286RIR5 GT4 5 470 1 476 0.5825 0.7952
A0A517Z2I8 GT2 1 470 10 498 0.5764 0.7561
B1FZW0 GT2 1 412 2 427 0.559 0.7668
A0A5Q0NSF2 GT2 1 470 6 848 0.5461 0.7158
A0A2R2WB60 GT2 1 469 25 972 0.5395 0.7473
A0A6G6WD04 GH39 1 435 17 461 0.5308 0.7336
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6gwh-assembly1.cif.gz_A 1 411 8 435 0.7801 0.8756
3vvn-assembly1.cif.gz_A 1 411 8 441 0.7779 0.8778
6z70-assembly1.cif.gz_A 1 411 14 442 0.774 0.8722
6hfb-assembly4.cif.gz_D 1 411 9 447 0.7702 0.8748
6hfb-assembly3.cif.gz_C 1 411 9 447 0.7651 0.8692
4mlb-assembly1.cif.gz_C 1 411 9 448 0.7636 0.8686
3vvp-assembly1.cif.gz_A 1 411 4 417 0.7559 0.8316
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q89AX2-F1-model_v4 1 411 6 451 0.7758 0.8804
AF-Q6FEY7-F1-model_v4 1 411 8 444 0.774 0.8764
AF-Q81T85-F1-model_v4 1 411 9 445 0.7735 0.8797
AF-Q73BB8-F1-model_v4 1 411 9 445 0.7733 0.8804
AF-B5QV34-F1-model_v4 1 411 6 446 0.77 0.8793
AF-Q7N3V2-F1-model_v4 1 411 6 446 0.7695 0.8789
AF-Q7WTR3-F1-model_v4 1 411 6 446 0.7695 0.8788
AF-Q6LQ49-F1-model_v4 1 411 6 445 0.7694 0.8779
AF-Q5PH16-F1-model_v4 1 411 6 446 0.7694 0.8787
AF-B1IQ91-F1-model_v4 1 411 6 446 0.7691 0.8784
Download Full SwissProt Results