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Cluster: ShaoY_2019_ERR3405833_bin.12_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405833_bin.12_k141_13821 ShaoY_2019_ERR3405833_bin.12_k141_13821_50 47617 49095 + GH1
TF ShaoY_2019_ERR3405833_bin.12_k141_13821 ShaoY_2019_ERR3405833_bin.12_k141_13821_51 49181 49909 + HTH_6
peptidase ShaoY_2019_ERR3405833_bin.12_k141_13821 ShaoY_2019_ERR3405833_bin.12_k141_13821_52 50017 50871 + S09.UPW
TC ShaoY_2019_ERR3405833_bin.12_k141_13821 ShaoY_2019_ERR3405833_bin.12_k141_13821_53 51199 52491 + 4.A.3.2.8
NULL(UNKNOWN) ShaoY_2019_ERR3405833_bin.12_k141_13821 ShaoY_2019_ERR3405833_bin.12_k141_13821_54 52578 53993 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405833_bin.12_k141_13821 ShaoY_2019_ERR3405833_bin.12_k141_13821_55 53997 55274 + GH140
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_13821_50
Type: CAZyme
Location: 47617 - 49095 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_13821_51
Type: TF
Location: 49181 - 49909 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_13821_52
Type: peptidase
Location: 50017 - 50871 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_13821_53
Type: TC
Location: 51199 - 52491 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_13821_54
Type:
Location: 52578 - 53993 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_13821_55
Type: CAZyme
Location: 53997 - 55274 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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