PROTEIN: ShaoY_2019_ERR3405833_bin.12_k141_13821_54
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405833_bin.12_k141_13821_54.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405833_bin.12_k141_13821_54
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Protein Sequence
MECKIRLGVV GTRRNIFSRE DAIKYNDIIL DKLKSMNIDI VDIKDINEEG LLFDESHVQP 60 IVDKLTSQKV DALFFPHCNF GTEDLVAKVA KNFNLPVLLW GPKDESPLEN GARLRDSQCG 120 LFATGKILRR FRVKFSYLTM CDVEDKQFED GINRFIATSN IVKEIRNLTV LQISTRPAGF 180 WTMMVNEGEL LEKFNIKVHP VTMVDVQKEM NRLVEEDGEE LQDVVNYMKE KMIINVSEDG 240 VRKTAALKIA MKNFANKYGC KAVAIQCWNS MQDALGIFPC VANSLLSDDG IPVACETDIH 300 GAITSVIAQA ATMGKVKPFF ADWTVPHPTN PNGELLQHCG PWPVSLMKGK PSFGAPFAFN 360 HSHPGALHGE LIGGDMSIIR FDGDNGEYSL LMGHAKGIEG PFNQGTYVWI EVENLKRLEE 420 KLVCGPYVHH CVGIHADILP QIYEACKYLG CLTPDFYDNI EEKVKEQLRG E 471
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132ZAR4-F1-model_v4 | 1 | 458 | 2 | 474 | 0.8622 |
0.9022 |
| AF-A0A0H3GN54-F1-model_v4 | 1 | 461 | 1 | 480 | 0.8452 |
0.9011 |
| AF-P08202-F1-model_v4 | 1 | 461 | 1 | 480 | 0.8446 |
0.9005 |
| AF-P06189-F1-model_v4 | 1 | 461 | 1 | 480 | 0.8444 |
0.9004 |
| AF-Q32K31-F1-model_v4 | 1 | 461 | 1 | 480 | 0.8442 |
0.9002 |
| AF-Q8DN24-F1-model_v4 | 1 | 469 | 1 | 562 | 0.7836 |
0.8824 |
| AF-P44779-F1-model_v4 | 1 | 469 | 3 | 564 | 0.7831 |
0.8823 |
| AF-A0A0H3GWX4-F1-model_v4 | 1 | 469 | 2 | 565 | 0.7826 |
0.883 |
| AF-Q8ZMC6-F1-model_v4 | 1 | 469 | 2 | 565 | 0.7825 |
0.8828 |
| AF-Q32CB6-F1-model_v4 | 1 | 469 | 2 | 565 | 0.7824 |
0.8828 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lql-assembly1.cif.gz_F | 1 | 458 | 2 | 474 | 0.8556 |
0.8962 |
| 7cxo-assembly1.cif.gz_C | 1 | 462 | 1 | 470 | 0.8515 |
0.8944 |
| 7chl-assembly1.cif.gz_D | 1 | 462 | 1 | 480 | 0.8507 |
0.903 |
| 4r1p-assembly1.cif.gz_C | 1 | 462 | 2 | 478 | 0.8482 |
0.8983 |
| 7cyy-assembly1.cif.gz_E | 1 | 462 | 1 | 474 | 0.8453 |
0.8935 |
| 7cyy-assembly1.cif.gz_F-2 | 1 | 462 | 1 | 475 | 0.8449 |
0.8936 |
| 2ajt-assembly1.cif.gz_A | 1 | 461 | 1 | 480 | 0.844 |
0.8985 |
| 7cx7-assembly1.cif.gz_F-2 | 1 | 462 | 1 | 472 | 0.8437 |
0.8902 |
| 4f2d-assembly1.cif.gz_A | 1 | 461 | 1 | 480 | 0.8429 |
0.8975 |
| 7cyy-assembly1.cif.gz_D | 1 | 462 | 2 | 472 | 0.8426 |
0.8887 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q88S84-F1-model_v4 | 1 | 459 | 2 | 474 | 0.8627 |
0.9008 |
| AF-Q03PR5-F1-model_v4 | 1 | 459 | 2 | 474 | 0.8626 |
0.9007 |
| AF-Q38UH2-F1-model_v4 | 1 | 459 | 2 | 474 | 0.8622 |
0.9003 |
| AF-Q03HQ0-F1-model_v4 | 1 | 459 | 2 | 474 | 0.8618 |
0.8999 |
| AF-Q65J10-F1-model_v4 | 1 | 458 | 2 | 474 | 0.8616 |
0.9015 |
| AF-Q8EMP4-F1-model_v4 | 1 | 458 | 2 | 474 | 0.8605 |
0.9005 |
| AF-Q5WL05-F1-model_v4 | 1 | 462 | 2 | 471 | 0.8602 |
0.9029 |
| AF-Q03XW2-F1-model_v4 | 1 | 459 | 1 | 474 | 0.8594 |
0.8977 |
| AF-Q97JE0-F1-model_v4 | 1 | 462 | 2 | 478 | 0.855 |
0.8996 |
| AF-A6M1T6-F1-model_v4 | 1 | 462 | 3 | 472 | 0.8534 |
0.8988 |