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Cluster: Rep_604_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_604_c_0 Rep_604_c_0_27 24039 26456 + GH127
peptidase Rep_604_c_0 Rep_604_c_0_28 26531 27862 + M64.UPW
CAZyme Rep_604_c_0 Rep_604_c_0_29 27882 29108 + CE15
NULL(UNKNOWN) Rep_604_c_0 Rep_604_c_0_30 29184 30461 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_604_c_0 Rep_604_c_0_31 31217 32689 - 2.A.1.4.11
sulfatase Rep_604_c_0 Rep_604_c_0_32 32816 33982 - S1_7
pfam Rep_604_c_0 Rep_604_c_0_33 34596 36833 + PHO4
CAZyme Rep_604_c_0 Rep_604_c_0_34 37209 38183 - GH43_34
Gene ID: Rep_604_c_0_27
Type: CAZyme
Location: 24039 - 26456 (+)
Gene ID: Rep_604_c_0_28
Type: peptidase
Location: 26531 - 27862 (+)
Gene ID: Rep_604_c_0_29
Type: CAZyme
Location: 27882 - 29108 (+)
Gene ID: Rep_604_c_0_30
Type:
Location: 29184 - 30461 (-)
Gene ID: Rep_604_c_0_31
Type: TC
Location: 31217 - 32689 (-)
Gene ID: Rep_604_c_0_32
Type: sulfatase
Location: 32816 - 33982 (-)
Gene ID: Rep_604_c_0_33
Type: pfam
Location: 34596 - 36833 (+)
Gene ID: Rep_604_c_0_34
Type: CAZyme
Location: 37209 - 38183 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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