PROTEIN: Rep_604_c_0_30
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Protein File & Metadata
Source:
Rep_604_c_0_30.pdb
Genome ID:
Protein ID:
Rep_604_c_0_30
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Protein Sequence
MRLLPLLWAV CFVEGMCKIQ GTFECMSTIQ LWITPQRDFT AFFPVLHIVI LGCMQLSTII 60 TTALMHHYHW VWMHLLVSAL MAVDLLIVRL CTRHFRIVRK MPLYGIDWLG ALLWVALLLQ 120 VAYLFDYGEW YDWWYSPVMR RLAVTSVATL ALCLWRMNTI RHPYIEPRMW SYRHLFPILI 180 LITLVEMLLA TEHVLEGAFY EQTMHYDATV SVLVTRWVLV GVLAGCGFAY WWMHVRRMSY 240 VRLLTVGIAA LAAYLLGYYF TVSADIHVSQ LYLPAACRGF AYAILSATFM VCLEEIMTFQ 300 HFFQALSVFN MLHMVVGGVI GAAIYTEAFT YYTADNMARY GAAVDSVAFT RAPFDMGAFM 360 EGFAGRMIET SVKQVYGWAA YACIGLLLLF LLYDAPARRA LKPIPMWRTV RSDVARSLRR 420 IVVRR 425
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A077ZFT9-F1-model_v4 | 33 | 403 | 1 | 342 | 0.792 |
0.8952 |
| AF-X8FBK7-F1-model_v4 | 1 | 403 | 16 | 405 | 0.7713 |
0.8403 |
| AF-Q32DH7-F1-model_v4 | 1 | 405 | 106 | 512 | 0.761 |
0.8823 |
| AF-Q9HZ88-F1-model_v4 | 1 | 404 | 87 | 493 | 0.7582 |
0.8718 |
| AF-G3XD81-F1-model_v4 | 1 | 409 | 99 | 506 | 0.7571 |
0.87 |
| AF-Q5F680-F1-model_v4 | 1 | 406 | 101 | 507 | 0.7544 |
0.8689 |
| AF-Q2FVL1-F1-model_v4 | 1 | 403 | 17 | 450 | 0.7544 |
0.8341 |
| AF-P0AEJ0-F1-model_v4 | 1 | 405 | 99 | 508 | 0.7457 |
0.8658 |
| AF-P52600-F1-model_v4 | 1 | 404 | 103 | 511 | 0.7444 |
0.8664 |
| AF-P44927-F1-model_v4 | 1 | 403 | 103 | 510 | 0.744 |
0.8664 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ARF89445.1 | GT1 | 1 | 401 | 552 | 953 | 0.6018 |
0.8848 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 1 | 416 | 133 | 682 | 0.5594 |
0.7964 |
| A0A9Q9RZ67 | GH78 | 1 | 408 | 992 | 1452 | 0.5035 |
0.8163 |
| F9G000 | GH3 | 1 | 412 | 92 | 568 | 0.4975 |
0.7958 |
| A0A8H8N5P0 | GH35 | 1 | 400 | 72 | 490 | 0.3906 |
0.6447 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ARF89445.1 | GT1 | 1 | 401 | 552 | 953 | 0.6018 |
0.8848 |
| A0A387HHJ8 | GT1 | 1 | 416 | 133 | 682 | 0.5594 |
0.7964 |
| A0A9Q9RZ67 | GH78 | 1 | 408 | 992 | 1452 | 0.5035 |
0.8163 |
| F9G000 | GH3 | 1 | 412 | 92 | 568 | 0.4975 |
0.7958 |
| A0A8H8N5P0 | GH35 | 1 | 400 | 72 | 490 | 0.3906 |
0.6447 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7y58-assembly1.cif.gz_A | 1 | 404 | 103 | 510 | 0.7045 |
0.8196 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 1 | 406 | 101 | 506 | 0.7529 |
0.8684 |
| AF-P0DPR7-F1-model_v4 | 1 | 400 | 106 | 512 | 0.7479 |
0.8773 |
| AF-P0AEJ1-F1-model_v4 | 1 | 405 | 99 | 508 | 0.7467 |
0.8663 |
| AF-P0AEJ0-F1-model_v4 | 1 | 405 | 99 | 508 | 0.7457 |
0.8658 |
| AF-P52600-F1-model_v4 | 1 | 404 | 103 | 511 | 0.7444 |
0.8664 |
| AF-P44927-F1-model_v4 | 1 | 403 | 103 | 510 | 0.744 |
0.8664 |
| AF-P38358-F1-model_v4 | 1 | 405 | 3 | 474 | 0.7388 |
0.8308 |
| AF-P32369-F1-model_v4 | 1 | 401 | 43 | 475 | 0.7313 |
0.8311 |
| AF-O35018-F1-model_v4 | 1 | 403 | 53 | 479 | 0.7248 |
0.822 |
| AF-P54585-F1-model_v4 | 1 | 402 | 50 | 512 | 0.7235 |
0.8591 |