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Cluster: Rep_309_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_309_c_57 Rep_309_c_57_1 108 1571 + GH125
pfam Rep_309_c_57 Rep_309_c_57_2 1598 2542 + Exo_endo_phos
pfam Rep_309_c_57 Rep_309_c_57_3 2612 3142 + Beta-AFase-like_GH127_cat
CAZyme Rep_309_c_57 Rep_309_c_57_4 3204 4166 + GH43_34
NULL(UNKNOWN) Rep_309_c_57 Rep_309_c_57_5 4058 4282 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_309_c_57 Rep_309_c_57_6 4340 5680 + AAA_14 | DUF4143
CAZyme Rep_309_c_57 Rep_309_c_57_7 5794 8379 + GH115
TC Rep_309_c_57 Rep_309_c_57_8 8427 8786 + 1.E.14.1.13
TC Rep_309_c_57 Rep_309_c_57_9 8791 9486 + 2.A.122.1.1
TC Rep_309_c_57 Rep_309_c_57_10 9948 10904 - 8.A.5.1.6
pfam Rep_309_c_57 Rep_309_c_57_11 11010 11405 - Glyco_hydro_36C
NULL(UNKNOWN) Rep_309_c_57 Rep_309_c_57_12 11598 11960 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_309_c_57 Rep_309_c_57_13 12067 13083 + GH43_17
NULL(UNKNOWN) Rep_309_c_57 Rep_309_c_57_14 13193 14125 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_309_c_57 Rep_309_c_57_15 14186 15715 - GH32
pfam Rep_309_c_57 Rep_309_c_57_16 15740 17110 - DUF4960
pfam Rep_309_c_57 Rep_309_c_57_17 17120 18850 - SusD_RagB | SusD-like_3
TC Rep_309_c_57 Rep_309_c_57_18 18863 21955 - 1.B.14.6.1
TF Rep_309_c_57 Rep_309_c_57_19 22140 24845 - HTH_AraC
CAZyme Rep_309_c_57 Rep_309_c_57_20 25094 26920 + GH32
TC Rep_309_c_57 Rep_309_c_57_21 26942 28126 + 2.A.1.7.17
STP Rep_309_c_57 Rep_309_c_57_22 28297 29175 + PfkB
pfam Rep_309_c_57 Rep_309_c_57_23 29298 29804 + PepSY_like | PepSY_like
CAZyme Rep_309_c_57 Rep_309_c_57_24 30247 31341 + CE2
NULL(UNKNOWN) Rep_309_c_57 Rep_309_c_57_25 31415 32635 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_309_c_57 Rep_309_c_57_26 32762 33280 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_309_c_57 Rep_309_c_57_27 33321 34481 + 2.A.66.1.7
Gene ID: Rep_309_c_57_1
Type: CAZyme
Location: 108 - 1571 (+)
Gene ID: Rep_309_c_57_2
Type: pfam
Location: 1598 - 2542 (+)
Gene ID: Rep_309_c_57_3
Type: pfam
Location: 2612 - 3142 (+)
Gene ID: Rep_309_c_57_4
Type: CAZyme
Location: 3204 - 4166 (+)
Gene ID: Rep_309_c_57_5
Type:
Location: 4058 - 4282 (-)
Gene ID: Rep_309_c_57_6
Type: pfam
Location: 4340 - 5680 (+)
Gene ID: Rep_309_c_57_7
Type: CAZyme
Location: 5794 - 8379 (+)
Gene ID: Rep_309_c_57_8
Type: TC
Location: 8427 - 8786 (+)
Gene ID: Rep_309_c_57_9
Type: TC
Location: 8791 - 9486 (+)
Gene ID: Rep_309_c_57_10
Type: TC
Location: 9948 - 10904 (-)
Gene ID: Rep_309_c_57_11
Type: pfam
Location: 11010 - 11405 (-)
Gene ID: Rep_309_c_57_12
Type:
Location: 11598 - 11960 (+)
Gene ID: Rep_309_c_57_13
Type: CAZyme
Location: 12067 - 13083 (+)
Gene ID: Rep_309_c_57_14
Type:
Location: 13193 - 14125 (-)
Gene ID: Rep_309_c_57_15
Type: CAZyme
Location: 14186 - 15715 (-)
Gene ID: Rep_309_c_57_16
Type: pfam
Location: 15740 - 17110 (-)
Gene ID: Rep_309_c_57_17
Type: pfam
Location: 17120 - 18850 (-)
Gene ID: Rep_309_c_57_18
Type: TC
Location: 18863 - 21955 (-)
Gene ID: Rep_309_c_57_19
Type: TF
Location: 22140 - 24845 (-)
Gene ID: Rep_309_c_57_20
Type: CAZyme
Location: 25094 - 26920 (+)
Gene ID: Rep_309_c_57_21
Type: TC
Location: 26942 - 28126 (+)
Gene ID: Rep_309_c_57_22
Type: STP
Location: 28297 - 29175 (+)
Gene ID: Rep_309_c_57_23
Type: pfam
Location: 29298 - 29804 (+)
Gene ID: Rep_309_c_57_24
Type: CAZyme
Location: 30247 - 31341 (+)
Gene ID: Rep_309_c_57_25
Type:
Location: 31415 - 32635 (+)
Gene ID: Rep_309_c_57_26
Type:
Location: 32762 - 33280 (-)
Gene ID: Rep_309_c_57_27
Type: TC
Location: 33321 - 34481 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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