PROTEIN: Rep_309_c_57_25
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Protein File & Metadata
Source:
Rep_309_c_57_25.pdb
Genome ID:
Protein ID:
Rep_309_c_57_25
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Protein Sequence
MRQGIKRIAA SVLALVGIVA MADAGQTKIF DYMYGGDGQR VCLRLPKENG VRAVLYAHQN 60 MTEEVLFRSP SFTHKMDSLG VAMVFVQSGS QNWDMSTGCQ ERFESIIDSL ASMSGHNEIK 120 TARIIPFGHS AQATFPWNFA AWNPDRTLCV ISYHGDAPRT NLCGYGRANV EWGRTRNIDR 180 IPALMVMGEY EWWDARLRPA LAFQMMYPDS RISFLCDAGR GHFDLSEATQ DYMARFIAKA 240 LENPRPEDGV RYSRWFEDGT ESTDSHEQFW YQDREMVDMT KARYAETRGK KMQYVSLKIN 300 GELLPYDKDS HVKINGRYHE GEFTVEPVFT DETRMTESDA HAAVRPRVVL ISGPAIQTGE 360 YTFRYDPDYF GRDPKRQWTG ITLCVEADGD ATYKPAVQEL NLSKAK 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1LA40-F1-model_v4 | 13 | 243 | 1 | 284 | 0.5522 |
0.7938 |
| AF-Q7KSB5-F1-model_v4 | 1 | 245 | 4 | 330 | 0.5273 |
0.7734 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| APR75171.1 | CE1 | 21 | 396 | 68 | 490 | 0.4511 |
0.5426 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| APR75171.1 | CE1 | 21 | 396 | 68 | 490 | 0.4511 |
0.5426 |
| A0A4P2QYM2 | CBM2 | 19 | 285 | 82 | 500 | 0.412 |
0.6699 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4fol-assembly2.cif.gz_C | 16 | 244 | 1 | 282 | 0.5497 |
0.7945 |
| 4flm-assembly1.cif.gz_B | 16 | 244 | 1 | 287 | 0.5416 |
0.7892 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.