dbCAN Logo

PROTEIN: Rep_309_c_57_26

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_309_c_57_26.pdb
Genome ID:
Rep_309
Protein ID:
Rep_309_c_57_26

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLMAARALLP   TNNPNKHHIA   PYSCVQADAS   TWRCGQPLPV   DGCLIMLCRE   GSAKFSISSR 60
LRTLRPGRMA   FITYDMVAVP   MQVSDDFKAV   CLRIGFNETL   DIFYLVTSNR   FWEFVFKSTV 120
CPVPYPLRGI   VSNWFSMLEW   IEANCSEPIR   FETIHNETEN   FMHIMADQIE   RL 172
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I6P1-F1-model_v4 15 172 17 177 0.5991 0.8274
AF-A0A0H3GRL8-F1-model_v4 15 172 12 170 0.5794 0.7935
AF-P03022-F1-model_v4 16 172 13 170 0.5784 0.7963
AF-A0A0H3GHT2-F1-model_v4 13 172 10 178 0.5725 0.7879
AF-P0A9E0-F1-model_v4 15 172 12 170 0.5716 0.7932
AF-Q8ZQ62-F1-model_v4 17 170 3 150 0.5681 0.7998
AF-A0A132Z5B4-F1-model_v4 15 172 35 204 0.566 0.8054
AF-A0A0H3GRB4-F1-model_v4 15 170 16 172 0.5645 0.794
AF-Q8ZQ45-F1-model_v4 13 170 10 176 0.56 0.7825
AF-P0A2S9-F1-model_v4 15 172 5 164 0.5586 0.7634
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F5YQV8-F1-model_v4 GH39 16 172 7 167 0.4177 0.7672
A0A8A7KC01 GH39 16 170 5 151 0.4158 0.8076
AF-A0A8A7KC01-F1-model_v4 GH39 16 170 5 151 0.4158 0.8076
A0A561CNF3 GH0 14 170 3 151 0.4141 0.7853
AF-A0A5B7TL71-F1-model_v4 GH39 13 170 1 153 0.413 0.7758
W1SJR6 GH39 14 170 7 156 0.4112 0.7781
AF-A0A3Q9I5R8-F1-model_v4 GH39 16 170 10 160 0.4106 0.7833
AF-A0A7G8QR14-F1-model_v4 GH0 18 170 3 145 0.4069 0.7992
AF-A0A7H8UDJ4-F1-model_v4 GH0 18 170 3 148 0.4065 0.7857
AF-W0HHS0-F1-model_v4 GH0 17 171 3 147 0.4036 0.7817
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
F5YQV8 GH39 16 172 7 167 0.4177 0.7672
A0A8A7KC01 GH39 16 170 5 151 0.4158 0.8076
W1SJR6 GH39 14 170 7 156 0.4112 0.7781
E4RMH6 GH39 16 172 5 733 0.4043 0.7418
M1MJF9 GH39 16 172 5 212 0.4028 0.7415
A0A7G5MX60 GH39 19 170 1 145 0.4006 0.7754
A0A7G5MNH9 GH39 18 172 3 548 0.399 0.7354
A0A089KS74 GH39 16 170 7 154 0.3976 0.7695
A0A1C6CAS9 GH39 17 170 5 153 0.3953 0.7527
A0A1C7IDR6 GH39 18 170 1 139 0.3952 0.8058
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6nwo-assembly1.cif.gz_A 20 172 7 152 0.7196 0.8254
1xja-assembly1.cif.gz_B 18 171 1 154 0.7125 0.7859
6nwj-assembly1.cif.gz_B 19 172 7 161 0.7086 0.7946
1xja-assembly3.cif.gz_E-2 13 171 1 163 0.705 0.7748
2arc-assembly1.cif.gz_A 16 169 7 161 0.7045 0.7918
5u93-assembly1.cif.gz_A 15 172 3 160 0.6824 0.754
5u9e-assembly1.cif.gz_B 15 172 4 156 0.6631 0.7462
6p7t-assembly1.cif.gz_A 17 171 2 161 0.5208 0.7171
5sux-assembly1.cif.gz_A 20 172 1 154 0.4902 0.6799
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P03022-F1-model_v4 16 172 13 170 0.5784 0.7963
AF-P11765-F1-model_v4 15 172 12 170 0.5755 0.7874
AF-P0A9E0-F1-model_v4 15 172 12 170 0.5716 0.7932
AF-P0A9E1-F1-model_v4 16 172 13 170 0.5711 0.7971
AF-Q00753-F1-model_v4 18 172 8 163 0.5683 0.7866
AF-Q8X897-F1-model_v4 15 172 5 164 0.5614 0.7655
AF-B5YZ43-F1-model_v4 15 172 5 164 0.5611 0.7667
AF-B7UNM6-F1-model_v4 15 172 5 164 0.561 0.7664
AF-B7NFK3-F1-model_v4 15 172 5 165 0.5606 0.7662
AF-B5F0M9-F1-model_v4 15 172 5 164 0.5604 0.7656
Download Full SwissProt Results