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Cluster: Rep_254_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_254_c_372 Rep_254_c_372_12 14840 17092 - 3.A.11.3.1
pfam Rep_254_c_372 Rep_254_c_372_13 17146 18873 - DUF6377
NULL(UNKNOWN) Rep_254_c_372 Rep_254_c_372_14 19058 21364 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_254_c_372 Rep_254_c_372_15 21386 23257 + GH32
pfam Rep_254_c_372 Rep_254_c_372_16 23339 23968 - OMP_b-brl | OMP_b-brl_2
pfam Rep_254_c_372 Rep_254_c_372_17 23990 25051 - GldN
TC Rep_254_c_372 Rep_254_c_372_18 25153 26709 - 9.A.25.1.1
pfam Rep_254_c_372 Rep_254_c_372_19 26726 27670 - GldL_N
TC Rep_254_c_372 Rep_254_c_372_20 27694 29136 - 9.A.25.1.1
Gene ID: Rep_254_c_372_12
Type: TC
Location: 14840 - 17092 (-)
Gene ID: Rep_254_c_372_13
Type: pfam
Location: 17146 - 18873 (-)
Gene ID: Rep_254_c_372_14
Type:
Location: 19058 - 21364 (+)
Gene ID: Rep_254_c_372_15
Type: CAZyme
Location: 21386 - 23257 (+)
Gene ID: Rep_254_c_372_16
Type: pfam
Location: 23339 - 23968 (-)
Gene ID: Rep_254_c_372_17
Type: pfam
Location: 23990 - 25051 (-)
Gene ID: Rep_254_c_372_18
Type: TC
Location: 25153 - 26709 (-)
Gene ID: Rep_254_c_372_19
Type: pfam
Location: 26726 - 27670 (-)
Gene ID: Rep_254_c_372_20
Type: TC
Location: 27694 - 29136 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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