PROTEIN: Rep_254_c_372_14
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Protein File & Metadata
Source:
Rep_254_c_372_14.pdb
Genome ID:
Protein ID:
Rep_254_c_372_14
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Detailed structural information will appear here after analysis...
Protein Sequence
MIHNYLYHTS HLNVIAVAAG LLLLGTPVFA QENTEKSKEE GNRNVMLNAS SANGPREIQI 60 GLPSADVNVL ENGLPVTYAT NPHSVNSIWR GDASLSHNGL LKISETAITT GNIGYAVNSY 120 TQLGQDGFHT TLNYKMNHFG QQEFSLNLNG GLGSGWYYSA NMYQDFDPGT FKIKSSQYQD 180 RTQIYKFALT KRYNGNRGEF TAMWHYANSH PAYTYATQSA PFIYGGDGSV KEYGKFKLGT 240 TSYLPTNSNI TYRDMRDGKL KETSLYDYIE NRTSNFSLLN NYNWDNGFSL KTMLRFDHAH 300 AALVYQTPMS LLDVKGNSQY AYKYIDDMNQ VQTYTGQYVQ TRMSCLNSGN INELLFTNEL 360 SKKFKTSTLR IGVNEWYYHI NYTSNTTMYD QSVPTDGSYA IRVYDSNLRN SYFYDFNKNA 420 SEYYKGYENK AALYLTHDWD ITRNFNLYYG ARFEYQKLHG QNAADKEGKY ARFADYYIGA 480 TNPTTGFKIT PSDLDYNWFN YDFTASATWK LTNEFGLTGD FTYIVQHPRF ENFAPATLPN 540 TDKVTVPLGR GGIYYNNSWL SLTSLFSYIS KTNNNSTLNL QHGSEIMAAP LTYDIQTWGW 600 TTDLVAKPVK GLDIHFLFTY QKPTYKKYET SVTFSDGYQG KIDATGNIVA EIPQVLIEFD 660 PSYMITKDIK IWTSWRYFGK TYANLNDAYY FGSHWETFGG VNWQANKHLG LGVDVVNFLN 720 QTGAKGTIAG SELVTKDEVK AANNYAGRLL TGSYLRPFTV EFTASLKF 768
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0CL48-F1-model_v4 | 1 | 768 | 21 | 702 | 0.7543 |
0.8197 |
| AF-A0A0H3GUM0-F1-model_v4 | 1 | 768 | 19 | 706 | 0.7503 |
0.8122 |
| AF-Q9I683-F1-model_v4 | 20 | 768 | 39 | 730 | 0.7454 |
0.8154 |
| AF-Q9HZT6-F1-model_v4 | 19 | 768 | 45 | 718 | 0.7449 |
0.8284 |
| AF-A0A0H3GNH3-F1-model_v4 | 9 | 768 | 12 | 709 | 0.7414 |
0.7932 |
| AF-Q9HUX3-F1-model_v4 | 15 | 768 | 31 | 708 | 0.7407 |
0.8134 |
| AF-A0A0H3H0D6-F1-model_v4 | 1 | 768 | 7 | 672 | 0.7392 |
0.8056 |
| AF-Q8ZRQ2-F1-model_v4 | 12 | 768 | 40 | 729 | 0.7365 |
0.8074 |
| AF-A0A0H3GPE7-F1-model_v4 | 19 | 768 | 25 | 690 | 0.7362 |
0.8132 |
| AF-Q0P814-F1-model_v4 | 27 | 768 | 30 | 709 | 0.735 |
0.8054 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2U8E3N6 | PL0 | 1 | 764 | 1948 | 3663 | 0.3505 |
0.5826 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6z8a-assembly1.cif.gz_A | 22 | 768 | 9 | 677 | 0.7668 |
0.8342 |
| 8a60-assembly1.cif.gz_A | 30 | 768 | 4 | 677 | 0.7655 |
0.8271 |
| 8b14-assembly1.cif.gz_A | 22 | 768 | 2 | 696 | 0.7563 |
0.8052 |
| 4cu4-assembly1.cif.gz_A | 22 | 768 | 1 | 693 | 0.7521 |
0.8014 |
| 5fp1-assembly1.cif.gz_A | 22 | 768 | 1 | 701 | 0.7511 |
0.7969 |
| 2fcp-assembly1.cif.gz_A | 21 | 768 | 1 | 705 | 0.7502 |
0.7932 |
| 4epa-assembly1.cif.gz_A | 34 | 768 | 11 | 631 | 0.7495 |
0.8448 |
| 3qlb-assembly2.cif.gz_B | 21 | 768 | 6 | 670 | 0.7468 |
0.8142 |
| 1by5-assembly1.cif.gz_A | 22 | 768 | 6 | 697 | 0.7441 |
0.7969 |
| 6bpo-assembly4.cif.gz_D | 22 | 768 | 1 | 711 | 0.7424 |
0.7832 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-E1W8M5-F1-model_v4 | 15 | 768 | 1 | 702 | 0.7618 |
0.8055 |
| AF-Q01674-F1-model_v4 | 8 | 768 | 20 | 710 | 0.7583 |
0.8199 |
| AF-P0CL48-F1-model_v4 | 1 | 768 | 21 | 702 | 0.7543 |
0.8197 |
| AF-Q47162-F1-model_v4 | 10 | 768 | 34 | 735 | 0.7454 |
0.8075 |
| AF-A1JTG3-F1-model_v4 | 21 | 768 | 23 | 672 | 0.7418 |
0.8269 |
| AF-P0C2M9-F1-model_v4 | 20 | 768 | 23 | 672 | 0.7411 |
0.8263 |
| AF-Q9HUX3-F1-model_v4 | 15 | 768 | 31 | 708 | 0.7407 |
0.8134 |
| AF-A0A0H2ZI93-F1-model_v4 | 1 | 768 | 18 | 708 | 0.7402 |
0.7992 |
| AF-P46359-F1-model_v4 | 26 | 768 | 20 | 672 | 0.739 |
0.8196 |
| AF-P75780-F1-model_v4 | 10 | 768 | 33 | 760 | 0.7349 |
0.7821 |