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Cluster: Rep_220_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_220_c_18 Rep_220_c_18_13 8834 9502 - 9.B.18.1.3
NULL(UNKNOWN) Rep_220_c_18 Rep_220_c_18_14 9616 10797 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_220_c_18 Rep_220_c_18_15 10808 11662 - GT2
pfam Rep_220_c_18 Rep_220_c_18_16 11672 12541 - Glycos_transf_2
NULL(UNKNOWN) Rep_220_c_18 Rep_220_c_18_17 12492 13400 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_220_c_18 Rep_220_c_18_18 13390 14220 - GT2
NULL(UNKNOWN) Rep_220_c_18 Rep_220_c_18_19 14208 15566 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_220_c_18 Rep_220_c_18_20 15568 16611 - 9.B.183.1.5
NULL(UNKNOWN) Rep_220_c_18 Rep_220_c_18_21 16623 17672 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_220_c_18 Rep_220_c_18_22 17726 20260 - 1.B.18.1.2
Gene ID: Rep_220_c_18_13
Type: TC
Location: 8834 - 9502 (-)
Gene ID: Rep_220_c_18_14
Type:
Location: 9616 - 10797 (-)
Gene ID: Rep_220_c_18_15
Type: CAZyme
Location: 10808 - 11662 (-)
Gene ID: Rep_220_c_18_16
Type: pfam
Location: 11672 - 12541 (-)
Gene ID: Rep_220_c_18_17
Type:
Location: 12492 - 13400 (-)
Gene ID: Rep_220_c_18_18
Type: CAZyme
Location: 13390 - 14220 (-)
Gene ID: Rep_220_c_18_19
Type:
Location: 14208 - 15566 (-)
Gene ID: Rep_220_c_18_20
Type: TC
Location: 15568 - 16611 (-)
Gene ID: Rep_220_c_18_21
Type:
Location: 16623 - 17672 (-)
Gene ID: Rep_220_c_18_22
Type: TC
Location: 17726 - 20260 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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