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PROTEIN: Rep_220_c_18_17

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Protein File & Metadata
Download PDB File
Source:
Rep_220_c_18_17.pdb
Genome ID:
Rep_220
Protein ID:
Rep_220_c_18_17

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Detailed structural information will appear here after analysis...

Protein Sequence 
MENNIPQAAA   KDAHVAVVLV   FYNPSESDIQ   NARTLSSVYG   GVIIDNSDKP   FTDETMIGRM 60
RYVCNHKNLG   IAEAQNIGIK   HILELGGYRH   IVFLDQDSRL   SASYPQDITS   EFIHISSTVT 120
NLASLGPTVS   NKDTGEEYRS   AIHTYQTDEN   GFSQRRHIIS   SGSCIPTKIL   RDVGFMDGGM 180
FIDYVDYEWC   WRAASKGYVC   GITSKIHINH   KVGKKELHIG   NYKIIISAPF   RYYYQYRNYF 240
WLIRKKYVPL   QWKIATGIKF   SLRLVYFPLL   VDGGTECWKF   IIKGIKHGVR   QENRRIDCIV 300
QP 302
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q32EF9-F1-model_v4 10 300 1 303 0.8456 0.8969
AF-Q32EG0-F1-model_v4 13 291 1 282 0.8237 0.8776
AF-Q9I4K5-F1-model_v4 10 302 1 316 0.8103 0.8825
AF-Q8ZQV3-F1-model_v4 11 297 1 298 0.7776 0.8322
AF-A0A0H3H0J5-F1-model_v4 13 297 1 297 0.776 0.8348
AF-P9WMX3-F1-model_v4 10 301 1 304 0.7658 0.818
AF-A0A132Z882-F1-model_v4 9 291 1 275 0.7492 0.8067
AF-Q9CDA1-F1-model_v4 31 302 1 281 0.7237 0.7993
AF-K0EQW5-F1-model_v4 10 302 49 348 0.7211 0.8136
AF-K0EYK6-F1-model_v4 2 276 1 293 0.6868 0.7684
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6M4MF78-F1-model_v4 GT2 13 301 1 286 0.9117 0.9491
AF-A0A3S5CA78-F1-model_v4 GT2 13 302 1 288 0.9116 0.9476
AF-S5BZ34-F1-model_v4 GT2 13 302 1 289 0.9114 0.9488
AF-A0A385MSS9-F1-model_v4 GT2 13 299 1 285 0.9113 0.9499
AF-F5Z4M6-F1-model_v4 GT2 13 302 1 288 0.9108 0.9469
AF-A0A7R7GBZ8-F1-model_v4 GT2 13 299 1 284 0.9096 0.9497
AF-A0A7S9DW85-F1-model_v4 GT2 13 299 1 285 0.9078 0.9468
AF-A0A075NTT7-F1-model_v4 GT2 13 300 1 285 0.9064 0.9456
AF-F2GBW7-F1-model_v4 GT2 13 299 1 286 0.903 0.9495
AKT09118.1 GT2 12 301 1 288 0.9017 0.9375
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1M5LDC2 GT2 14 299 1 286 0.9124 0.9495
A0A3R6MQY2 GT2 10 302 1 290 0.9094 0.9431
A0A7D7BVK8 GT2 5 294 1 287 0.9082 0.9427
A6M9D9 GT2 11 302 1 295 0.9047 0.939
D1PA60 GT2 8 294 6 292 0.9042 0.9607
A0A3S8ZWL6 GT2 11 300 1 291 0.9026 0.9354
A0A5P9ELY1 GT2 11 300 1 288 0.902 0.9368
AKT09118.1 GT2 12 301 1 288 0.9017 0.9375
A0A172X0K9 GT2 10 301 1 294 0.8973 0.9289
K0EDG4 GT2 13 302 1 293 0.8969 0.9405
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5hea-assembly1.cif.gz_A 12 289 1 266 0.6331 0.7081
6p61-assembly2.cif.gz_B 9 212 1 191 0.632 0.7907
6p61-assembly3.cif.gz_C 9 213 1 190 0.6282 0.7877
6h1j-assembly1.cif.gz_C 10 290 1 275 0.6141 0.7065
6hnq-assembly1.cif.gz_C 10 290 1 274 0.6135 0.7067
6h4m-assembly4.cif.gz_Q 10 290 1 276 0.6135 0.7034
6h4m-assembly2.cif.gz_I 10 290 1 277 0.6118 0.7009
6hnq-assembly4.cif.gz_Q 10 290 1 277 0.6118 0.6992
6h4f-assembly2.cif.gz_I 10 290 1 273 0.6117 0.7058
6hnq-assembly2.cif.gz_H 10 290 1 280 0.6111 0.6963
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37782-F1-model_v4 11 301 1 296 0.8513 0.8918
AF-A0R5Z2-F1-model_v4 7 299 1 302 0.7689 0.8154
AF-D4GU63-F1-model_v4 8 301 13 307 0.7665 0.8156
AF-P9WMX3-F1-model_v4 10 301 1 304 0.7658 0.818
AF-P9WMX2-F1-model_v4 10 301 1 304 0.7646 0.8168
AF-P36667-F1-model_v4 14 250 1 251 0.6765 0.8159
AF-Q4KXC9-F1-model_v4 10 263 4 254 0.6696 0.7548
AF-Q46635-F1-model_v4 14 272 1 257 0.6691 0.7556
AF-Q03084-F1-model_v4 8 271 1 263 0.6652 0.7487
AF-P71054-F1-model_v4 8 272 1 257 0.6613 0.7625
Download Full SwissProt Results