PROTEIN: Rep_220_c_18_21
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Protein File & Metadata
Source:
Rep_220_c_18_21.pdb
Genome ID:
Protein ID:
Rep_220_c_18_21
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Protein Sequence
MEENKELEVI DLKIIFKKIW AGRKLFYKVL PITFVISCLY ILCIPRTYTS SLSLAPELNS 60 SSGIGGTLGS LASSFGFDLD NLETSDAINP MLYPDLMDDN GFVVGLFDIK VKSADGEISC 120 NYFDYLTKHQ DRPFWTAAIN AIKDLLPKKE DPFAKNGKRD PYILSKRQDD IANLIRNKIS 180 IGFDKKTAVI SIDAEAQDAL IAKILCDSVK ERLQIFITNY RTNKARIDER YYKQLVTEAK 240 HDYEQARQLY GTYADANTDV QMASFRAKQD DLENDMQLKY NTYITLMAQY QTAKAKVQER 300 TPAFTVVKGA SVAPKPVKPK RMVFVLAMCF LAFIATGLYI YFFSEEKQK 349
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CF17-F1-model_v4 | 5 | 349 | 1 | 201 | 0.5674 |
0.8365 |
| AF-Q9I1N4-F1-model_v4 | 10 | 349 | 4 | 618 | 0.5309 |
0.7186 |
| AF-Q0P8G9-F1-model_v4 | 29 | 335 | 24 | 354 | 0.5021 |
0.6011 |
| AF-K0EV96-F1-model_v4 | 10 | 349 | 1 | 389 | 0.4551 |
0.5197 |
| AF-Q9F7B1-F1-model_v4 | 1 | 349 | 9 | 451 | 0.4485 |
0.6082 |
| AF-P76387-F1-model_v4 | 1 | 349 | 10 | 452 | 0.4451 |
0.6051 |
| AF-K0EZX4-F1-model_v4 | 10 | 349 | 1 | 408 | 0.4405 |
0.5139 |
| AF-P38134-F1-model_v4 | 3 | 349 | 11 | 452 | 0.432 |
0.5911 |
| AF-A0A0H3GVU7-F1-model_v4 | 4 | 349 | 11 | 452 | 0.4288 |
0.5854 |
| AF-Q32HS6-F1-model_v4 | 5 | 349 | 13 | 452 | 0.4271 |
0.5871 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UBM63584.1 | CBM50 | 5 | 349 | 1 | 910 | 0.4313 |
0.6452 |
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 1 | 349 | 17 | 481 | 0.4291 |
0.6529 |
| AF-A0A1L5P6C4-F1-model_v4 | GT0 | 1 | 349 | 15 | 481 | 0.4267 |
0.6494 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 1 | 349 | 15 | 481 | 0.4245 |
0.6448 |
| AF-A0A387H7L2-F1-model_v4 | GT0 | 2 | 349 | 18 | 481 | 0.4213 |
0.6429 |
| A0A2L0WKS9 | GT0 | 3 | 349 | 19 | 482 | 0.4181 |
0.6401 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 3 | 349 | 19 | 482 | 0.4181 |
0.6401 |
| QNN05996.1 | GT4 | 1 | 349 | 2 | 466 | 0.3854 |
0.5966 |
| WGH78710.1 | PL1_2 | 3 | 349 | 27 | 652 | 0.357 |
0.5511 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8c0e-assembly1.cif.gz_B | 29 | 332 | 1 | 275 | 0.5196 |
0.5957 |
| 8c0e-assembly1.cif.gz_D | 29 | 332 | 1 | 276 | 0.5187 |
0.5937 |
| 7nhr-assembly1.cif.gz_G | 10 | 349 | 1 | 313 | 0.4748 |
0.6539 |
| 7nii-assembly1.cif.gz_H | 10 | 349 | 1 | 314 | 0.4703 |
0.6469 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P32014-F1-model_v4 | 18 | 346 | 22 | 383 | 0.5806 |
0.6653 |
| AF-P59221-F1-model_v4 | 6 | 349 | 8 | 205 | 0.5762 |
0.8105 |
| AF-Q3K0S9-F1-model_v4 | 6 | 349 | 8 | 205 | 0.5755 |
0.8095 |
| AF-Q04662-F1-model_v4 | 6 | 349 | 8 | 205 | 0.5743 |
0.8073 |
| AF-P0C0T8-F1-model_v4 | 6 | 349 | 8 | 205 | 0.5741 |
0.8072 |
| AF-Q54519-F1-model_v4 | 1 | 349 | 1 | 204 | 0.5734 |
0.7841 |
| AF-P22930-F1-model_v4 | 10 | 338 | 13 | 363 | 0.5536 |
0.6271 |
| AF-P33698-F1-model_v4 | 2 | 349 | 20 | 726 | 0.4689 |
0.6555 |
| AF-P43111-F1-model_v4 | 19 | 349 | 77 | 434 | 0.4682 |
0.5589 |
| AF-Q9F7B1-F1-model_v4 | 1 | 349 | 9 | 451 | 0.4485 |
0.6082 |