Cluster: Rep_1259_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1259
- CGC Family ID: CGCFAM_02991
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1259_c_1 | Rep_1259_c_1_118 | 133083 | 133832 | + | 8.A.3.3.2 |
| pfam | Rep_1259_c_1 | Rep_1259_c_1_119 | 133774 | 134517 | + | PHP | CpsB_CapC |
| TC | Rep_1259_c_1 | Rep_1259_c_1_120 | 134571 | 135233 | + | 9.B.18.1.2 |
| CAZyme | Rep_1259_c_1 | Rep_1259_c_1_121 | 135236 | 136375 | + | GT4 |
| CAZyme | Rep_1259_c_1 | Rep_1259_c_1_122 | 136380 | 137600 | + | GT4 |
| NULL(UNKNOWN) | Rep_1259_c_1 | Rep_1259_c_1_123 | 137606 | 138829 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1259_c_1 | Rep_1259_c_1_124 | 138826 | 139791 | + | GT2 |
Gene ID: Rep_1259_c_1_118
Type: TC
Location: 133083 - 133832 (+)
Type: TC
Location: 133083 - 133832 (+)
Gene ID: Rep_1259_c_1_119
Type: pfam
Location: 133774 - 134517 (+)
Type: pfam
Location: 133774 - 134517 (+)
Gene ID: Rep_1259_c_1_120
Type: TC
Location: 134571 - 135233 (+)
Type: TC
Location: 134571 - 135233 (+)
Gene ID: Rep_1259_c_1_121
Type: CAZyme
Location: 135236 - 136375 (+)
Type: CAZyme
Location: 135236 - 136375 (+)
Gene ID: Rep_1259_c_1_122
Type: CAZyme
Location: 136380 - 137600 (+)
Type: CAZyme
Location: 136380 - 137600 (+)
Gene ID: Rep_1259_c_1_123
Type:
Location: 137606 - 138829 (+)
Type:
Location: 137606 - 138829 (+)
Gene ID: Rep_1259_c_1_124
Type: CAZyme
Location: 138826 - 139791 (+)
Type: CAZyme
Location: 138826 - 139791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp900546545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.