PROTEIN: Rep_1259_c_1_123
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Protein File & Metadata
Source:
Rep_1259_c_1_123.pdb
Genome ID:
Protein ID:
Rep_1259_c_1_123
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Protein Sequence
MQELLFEFFT FTFPKAGILL GGIPLSAALI LLALYVIIHA RGVIRTVESK SILGWPYLIW 60 IFFYVLVVFN NLNAESFTFR MAEGFLYMVS PLAILLGMKA HPVKALKVMY IAVCIVSVFA 120 ILQFFVGIEA TKIPGLTIAL NDSYARKMIG FGMNDVEAIK MPSTYQEGNS MGVFLLEMVP 180 VLVWDLYKNR SFDRYRFLRI LIVGLGCFGI FLSGSRSVIA SSLLLVIPFT ITLLRHFRKK 240 QLVNLLILIL AFLFLLIVLD QKLQWGLWER FYHRYIEMTF FSTGGSSGTS GRIDQWMTLV 300 NRMTESDPMM FLKTMLLGFS WKNAVIVEGF LYIFSCYGLF GLLSILILMI RPIRIGFQVH 360 PFWGFSFLAV FFVLCVDRTF CSTPTLMNYF FMAGLALQLR KKRQVKV 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44067-F1-model_v4 | 1 | 398 | 9 | 399 | 0.6983 |
0.7424 |
| AF-Q5FA54-F1-model_v4 | 1 | 402 | 18 | 427 | 0.5995 |
0.7349 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B8IGI7-F1-model_v4 | GH16_7 | 1 | 407 | 20 | 459 | 0.5653 |
0.7671 |
| UII34295.1 | GT4 | 1 | 407 | 18 | 422 | 0.5643 |
0.7511 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 407 | 19 | 451 | 0.5533 |
0.7236 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 1 | 407 | 6 | 508 | 0.5514 |
0.6932 |
| AF-R4KL74-F1-model_v4 | GT4 | 1 | 407 | 47 | 445 | 0.5478 |
0.7617 |
| USX27957.1 | GT9 | 1 | 407 | 17 | 416 | 0.5458 |
0.7266 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 407 | 28 | 419 | 0.5454 |
0.7449 |
| AF-D9S8K7-F1-model_v4 | GT4 | 1 | 407 | 15 | 786 | 0.5429 |
0.7214 |
| AF-Q57EC5-F1-model_v4 | GT25 | 1 | 407 | 274 | 696 | 0.5406 |
0.6923 |
| A0A9Q9IL13 | GT4 | 1 | 407 | 23 | 502 | 0.5261 |
0.7375 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B8IGI7 | GH16_7 | 1 | 407 | 20 | 459 | 0.5653 |
0.7671 |
| UII34295.1 | GT4 | 1 | 407 | 18 | 422 | 0.5643 |
0.7511 |
| A0A517MXC4 | GT26 | 1 | 407 | 19 | 451 | 0.5533 |
0.7236 |
| R4KL74 | GT4 | 1 | 407 | 47 | 445 | 0.5478 |
0.7617 |
| USX27957.1 | GT9 | 1 | 407 | 17 | 416 | 0.5458 |
0.7266 |
| D5MJ04 | GT9 | 1 | 407 | 28 | 419 | 0.5454 |
0.7449 |
| D9S8K7 | GT4 | 1 | 407 | 15 | 786 | 0.5429 |
0.7214 |
| A0A0H3AT40 | GT25 | 1 | 405 | 328 | 752 | 0.5276 |
0.6963 |
| A0A9Q9IL13 | GT4 | 1 | 407 | 23 | 502 | 0.5261 |
0.7375 |
| A0A5B7R2V6 | GH5_39 | 1 | 406 | 388 | 793 | 0.4919 |
0.6609 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 1 | 405 | 7 | 403 | 0.6282 |
0.6639 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 19 | 400 | 1 | 391 | 0.7447 |
0.8027 |
| AF-P44067-F1-model_v4 | 1 | 398 | 9 | 399 | 0.6983 |
0.7424 |
| AF-O32270-F1-model_v4 | 1 | 407 | 66 | 484 | 0.6355 |
0.7074 |
| AF-Q02729-F1-model_v4 | 1 | 407 | 8 | 408 | 0.6143 |
0.6636 |