Cluster: Rep_108_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_108_c_3 | Rep_108_c_3_14 | 17045 | 18874 | - | 2.A.47.4.8 |
| STP | Rep_108_c_3 | Rep_108_c_3_15 | 19052 | 20236 | - | Aminotran_1_2 |
| TC | Rep_108_c_3 | Rep_108_c_3_16 | 20887 | 24048 | + | 1.B.14.6.13 |
| TC | Rep_108_c_3 | Rep_108_c_3_17 | 24065 | 25717 | + | 8.A.46.1.3 |
| NULL(UNKNOWN) | Rep_108_c_3 | Rep_108_c_3_18 | 25819 | 26745 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_108_c_3 | Rep_108_c_3_19 | 26742 | 29681 | + | GH92 |
Gene ID: Rep_108_c_3_14
Type: TC
Location: 17045 - 18874 (-)
Type: TC
Location: 17045 - 18874 (-)
Gene ID: Rep_108_c_3_15
Type: STP
Location: 19052 - 20236 (-)
Type: STP
Location: 19052 - 20236 (-)
Gene ID: Rep_108_c_3_16
Type: TC
Location: 20887 - 24048 (+)
Type: TC
Location: 20887 - 24048 (+)
Gene ID: Rep_108_c_3_17
Type: TC
Location: 24065 - 25717 (+)
Type: TC
Location: 24065 - 25717 (+)
Gene ID: Rep_108_c_3_18
Type:
Location: 25819 - 26745 (+)
Type:
Location: 25819 - 26745 (+)
Gene ID: Rep_108_c_3_19
Type: CAZyme
Location: 26742 - 29681 (+)
Type: CAZyme
Location: 26742 - 29681 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.