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PROTEIN: Rep_108_c_3_18

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Protein File & Metadata
Download PDB File
Source:
Rep_108_c_3_18.pdb
Genome ID:
Rep_108
Protein ID:
Rep_108_c_3_18

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Detailed structural information will appear here after analysis...

Protein Sequence 
MEKSSPLWII   ALLLTIGMVG   GCGSEPEKRL   IDLAIVGTHD   AAAYNASPRL   RCQDLTLEEQ 60
LEVGVRAFDL   RLVDRYDGSG   RMDLYHGKES   LGLEFTEEVL   PLFTQFLTAH   PDEFVILSLR 120
KEDDDHHSPD   EMEAYSLSLL   RALERPEVAR   LLYRGELTPA   TKVSEVRGKL   LILLRTRIGN 180
DVCMPYFDGF   QDDTTFTARL   VNPCGGTLDL   MVEDKYMVYD   TIGMRDKKSA   LSEVLDLAET 240
MPDHWMIAYL   SGTGDPTPEA   VAEEINPFAY   RLLRERTSLP   GGIYFMDFAG   TPEARAIITL 300
CKKHNSKI 308
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5ALJ2-F1-model_v4 24 307 11 295 0.7986 0.8618
AF-Q5A0L4-F1-model_v4 24 307 11 295 0.7976 0.8607
AF-Q2G1Q2-F1-model_v4 25 308 42 328 0.7704 0.8728
AF-A5WV54-F1-model_v4 25 307 50 299 0.7539 0.9224
AF-E9QDS6-F1-model_v4 24 308 6 299 0.7141 0.7837
AF-F1QCZ7-F1-model_v4 25 307 42 283 0.7126 0.8768
AF-A0A2R8QRJ0-F1-model_v4 25 308 45 290 0.7107 0.8711
AF-A0A2R8QD68-F1-model_v4 25 307 45 289 0.7098 0.8718
AF-E7F6Q4-F1-model_v4 25 307 46 290 0.7087 0.8719
AF-E7F812-F1-model_v4 25 305 45 288 0.7084 0.872
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UHQ24446.1 CBM13 25 308 17 307 0.68 0.8965
D7VP01 CBM13 25 308 13 300 0.6779 0.8824
AF-A0A1V0UZE7-F1-model_v4 CBM13 25 308 5 303 0.6424 0.8281
AF-A0A2L1TVS7-F1-model_v4 CBM13 25 308 25 323 0.6313 0.828
AF-A0A1U9YPT4-F1-model_v4 CBM13 25 308 25 323 0.6311 0.8277
A0A9J7AAC7 CBM13 25 308 46 385 0.6311 0.8305
BCT91095.1 CBM13 25 308 52 478 0.6253 0.8296
AF-A0A1W6AJ48-F1-model_v4 CBM13 24 308 23 337 0.6247 0.8259
AF-A0A1S6HN06-F1-model_v4 CBM13 25 308 42 337 0.6241 0.8265
QTL94381.1 CBM13 25 308 42 338 0.6232 0.8267
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UHQ24446.1 CBM13 25 308 17 307 0.68 0.8965
D7VP01 CBM13 25 308 13 300 0.6779 0.8824
A0A9J7AAC7 CBM13 25 308 46 385 0.6311 0.8305
BCT91095.1 CBM13 25 308 52 478 0.6253 0.8296
QTL94381.1 CBM13 25 308 42 338 0.6232 0.8267
A0A0U2MWD1 CBM13 25 308 47 349 0.6212 0.8362
QPW51669.1 CBM13 18 308 1 369 0.6181 0.8197
A0A2C9Z473 CBM13 24 308 53 350 0.6161 0.8232
QWH75487.1 CBM13 24 308 50 346 0.6128 0.8177
AFU17324.1 CBM13 24 308 54 365 0.6099 0.8249
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4s3g-assembly1.cif.gz_A 25 307 15 300 0.8037 0.8764
2ptd-assembly1.cif.gz_A 24 308 17 295 0.8027 0.8817
1t6m-assembly1.cif.gz_B 25 308 18 295 0.8025 0.8843
4rv3-assembly1.cif.gz_A 25 308 15 301 0.8024 0.8733
4f2u-assembly1.cif.gz_A 25 308 15 303 0.802 0.8774
3ptd-assembly1.cif.gz_A 25 308 18 295 0.8018 0.8836
5ptd-assembly1.cif.gz_A 25 308 18 295 0.8017 0.8835
6ptd-assembly1.cif.gz_A 25 308 18 295 0.8015 0.8833
4ptd-assembly1.cif.gz_A 25 308 18 295 0.8013 0.883
6s2a-assembly3.cif.gz_C 25 308 18 295 0.8013 0.8831
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P45723-F1-model_v4 25 308 26 312 0.7884 0.8728
AF-Q2G1Q2-F1-model_v4 25 308 42 328 0.7704 0.8728
AF-P08954-F1-model_v4 18 308 20 326 0.7669 0.8492
AF-P14262-F1-model_v4 25 308 49 326 0.7639 0.8843
AF-Q58EK3-F1-model_v4 24 308 21 318 0.6983 0.7851
AF-Q567I4-F1-model_v4 24 308 16 308 0.6958 0.768
AF-Q9NUJ7-F1-model_v4 24 308 29 320 0.6844 0.7699
AF-B2RXA1-F1-model_v4 24 308 41 332 0.6825 0.7852
AF-Q8CHS4-F1-model_v4 24 308 51 342 0.6647 0.7699
AF-P09194-F1-model_v4 24 308 19 354 0.6647 0.7831
Download Full SwissProt Results