Cluster: HRGMv2_4774_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4774
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4774_37 | HRGMv2_4774_37_10 | 8212 | 10212 | - | 3.A.11.3.1 |
| pfam | HRGMv2_4774_37 | HRGMv2_4774_37_11 | 10294 | 11067 | - | UDG |
| NULL(UNKNOWN) | HRGMv2_4774_37 | HRGMv2_4774_37_12 | 11149 | 12891 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4774_37 | HRGMv2_4774_37_13 | 12901 | 14037 | + | GT28 |
Gene ID: HRGMv2_4774_37_10
Type: TC
Location: 8212 - 10212 (-)
Type: TC
Location: 8212 - 10212 (-)
Gene ID: HRGMv2_4774_37_11
Type: pfam
Location: 10294 - 11067 (-)
Type: pfam
Location: 10294 - 11067 (-)
Gene ID: HRGMv2_4774_37_12
Type:
Location: 11149 - 12891 (+)
Type:
Location: 11149 - 12891 (+)
Gene ID: HRGMv2_4774_37_13
Type: CAZyme
Location: 12901 - 14037 (+)
Type: CAZyme
Location: 12901 - 14037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp002437725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.