PROTEIN: HRGMv2_4774_37_12
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Protein File & Metadata
Source:
HRGMv2_4774_37_12.pdb
Genome ID:
Protein ID:
HRGMv2_4774_37_12
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Detailed structural information will appear here after analysis...
Protein Sequence
MKKLRLLSTL FFISLFSTFL FAQVGVEVND EFYFDTLGWY LKGYVKTIPQ VKPYPIFVVE 60 DILNQVLENG EKDEQAKALN YRSRFFEKKW HLCADGNADI KIKIPQKTDS SLSNDLIHKE 120 LYSGGIYTVG DFLFNDFFAL SYSVGVRGFN NNVALEQVNP KYIYDSRKQK LKPFAFDFGD 180 VSLLPDAKIS AFLGNKDLFV TAGLNKVGYS LFPYSDLVLN PNSYQLLNTS FNYYGKRFSY 240 VQLFALLTSN GYSQSYKFNK FLSFHSIRFP FFKERFTISL FESAIFGDGF VPQYIMPVPF 300 FIMNKIDGSQ ANVLAGIDFT WKPVKSLALN SEMLINDIGI KDFIKFHWNS AHIRSALRFG 360 AVYSPENSIC NLMSIDYTLV TPYTYTAYVA DSDSYNTKDY VNAGMCVGSE LPPNSDRVIV 420 RLEFRPFSSL KISSFTSFVR HSNPYLSLSD QEVVDLIKSG AEFDSSGSVK TDTRGMDSAE 480 SYTNFLRQDT VMYTVQVGVT GEYEFLAARN MRVSLIGGYK FEYTREDGID TPIYKNVALP 540 KDDLDGTLSI QAVKDAREAW LSSLVDSFNN YLSIGFKIIY 580
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSK2-F1-model_v4 | 23 | 580 | 24 | 475 | 0.6812 |
0.7974 |
| AF-Q9I6P8-F1-model_v4 | 31 | 580 | 8 | 419 | 0.5817 |
0.698 |
| AF-Q9I161-F1-model_v4 | 24 | 580 | 12 | 470 | 0.5812 |
0.6712 |
| AF-Q9HY38-F1-model_v4 | 30 | 580 | 7 | 415 | 0.5779 |
0.6946 |
| AF-P32722-F1-model_v4 | 23 | 580 | 6 | 440 | 0.5772 |
0.6791 |
| AF-Q9I6X0-F1-model_v4 | 35 | 580 | 3 | 443 | 0.5719 |
0.6659 |
| AF-Q7CQY4-F1-model_v4 | 70 | 580 | 3 | 467 | 0.568 |
0.6466 |
| AF-Q9I0E2-F1-model_v4 | 57 | 580 | 3 | 432 | 0.5644 |
0.6649 |
| AF-Q9HWP4-F1-model_v4 | 86 | 580 | 31 | 416 | 0.5614 |
0.7118 |
| AF-A0A0H3GU17-F1-model_v4 | 86 | 580 | 37 | 464 | 0.5612 |
0.685 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2ynk-assembly1.cif.gz_A | 23 | 580 | 1 | 439 | 0.6953 |
0.8036 |
| 3jty-assembly2.cif.gz_B | 56 | 580 | 1 | 382 | 0.5885 |
0.7208 |
| 7vu1-assembly1.cif.gz_A | 56 | 580 | 1 | 434 | 0.5823 |
0.6801 |
| 3t24-assembly4.cif.gz_A-2 | 57 | 580 | 3 | 375 | 0.5821 |
0.7216 |
| 5dl8-assembly2.cif.gz_A | 54 | 580 | 1 | 389 | 0.5821 |
0.7095 |
| 3jty-assembly1.cif.gz_A | 56 | 580 | 1 | 387 | 0.5817 |
0.7093 |
| 3szd-assembly2.cif.gz_A | 57 | 580 | 2 | 366 | 0.5814 |
0.7263 |
| 4fms-assembly1.cif.gz_B | 56 | 580 | 1 | 367 | 0.5804 |
0.722 |
| 3szd-assembly1.cif.gz_B | 56 | 580 | 1 | 368 | 0.5803 |
0.7232 |
| 7acg-assembly1.cif.gz_A | 23 | 580 | 3 | 457 | 0.5788 |
0.6622 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48449-F1-model_v4 | 5 | 580 | 5 | 502 | 0.6721 |
0.739 |
| AF-P32722-F1-model_v4 | 23 | 580 | 6 | 440 | 0.5772 |
0.6791 |
| AF-P75733-F1-model_v4 | 86 | 580 | 37 | 467 | 0.56 |
0.6804 |
| AF-Q88NC8-F1-model_v4 | 1 | 580 | 3 | 492 | 0.5527 |
0.6131 |
| AF-P18895-F1-model_v4 | 6 | 580 | 17 | 490 | 0.5521 |
0.6289 |
| AF-Q88FY7-F1-model_v4 | 57 | 580 | 31 | 429 | 0.5498 |
0.6862 |
| AF-Q887Q2-F1-model_v4 | 1 | 580 | 2 | 493 | 0.5422 |
0.5993 |
| AF-Q44497-F1-model_v4 | 10 | 580 | 10 | 484 | 0.5378 |
0.608 |
| AF-A8GKC3-F1-model_v4 | 86 | 579 | 23 | 434 | 0.528 |
0.6443 |
| AF-Q664X6-F1-model_v4 | 86 | 580 | 22 | 423 | 0.522 |
0.6425 |