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Cluster: HRGMv2_4568_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4568_5 HRGMv2_4568_5_2 1584 3881 - GH74 | GH74
CAZyme HRGMv2_4568_5 HRGMv2_4568_5_3 4063 6210 - GH36
NULL(UNKNOWN) HRGMv2_4568_5 HRGMv2_4568_5_4 6564 7889 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4568_5 HRGMv2_4568_5_5 8073 8648 - SseB
CAZyme HRGMv2_4568_5 HRGMv2_4568_5_6 8669 9622 - GT2
pfam HRGMv2_4568_5 HRGMv2_4568_5_7 9641 10330 - TatD_DNase
CAZyme HRGMv2_4568_5 HRGMv2_4568_5_8 10699 11766 + CE2
pfam HRGMv2_4568_5 HRGMv2_4568_5_9 12263 13744 + HlyD_3 | Biotin_lipoyl_2
TC HRGMv2_4568_5 HRGMv2_4568_5_10 13762 14631 + 3.A.1.122.2
pfam HRGMv2_4568_5 HRGMv2_4568_5_11 14628 16475 + Biotin_lipoyl_2
TC HRGMv2_4568_5 HRGMv2_4568_5_12 16490 17764 + 3.A.1.122.2
Gene ID: HRGMv2_4568_5_2
Type: CAZyme
Location: 1584 - 3881 (-)
Gene ID: HRGMv2_4568_5_3
Type: CAZyme
Location: 4063 - 6210 (-)
Gene ID: HRGMv2_4568_5_4
Type:
Location: 6564 - 7889 (-)
Gene ID: HRGMv2_4568_5_5
Type: pfam
Location: 8073 - 8648 (-)
Gene ID: HRGMv2_4568_5_6
Type: CAZyme
Location: 8669 - 9622 (-)
Gene ID: HRGMv2_4568_5_7
Type: pfam
Location: 9641 - 10330 (-)
Gene ID: HRGMv2_4568_5_8
Type: CAZyme
Location: 10699 - 11766 (+)
Gene ID: HRGMv2_4568_5_9
Type: pfam
Location: 12263 - 13744 (+)
Gene ID: HRGMv2_4568_5_10
Type: TC
Location: 13762 - 14631 (+)
Gene ID: HRGMv2_4568_5_11
Type: pfam
Location: 14628 - 16475 (+)
Gene ID: HRGMv2_4568_5_12
Type: TC
Location: 16490 - 17764 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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