PROTEIN: HRGMv2_4568_5_4
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Protein File & Metadata
Source:
HRGMv2_4568_5_4.pdb
Genome ID:
Protein ID:
HRGMv2_4568_5_4
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Protein Sequence
MAEFFKDIPK IKFEGTNSTN PLAFKYYDPD EVVMGKTMRE QLKFALSWWH TMGGDGTDMF 60 GCGTTDKTWG ESDPAARAKA KVDAAFEIMD KLSIDYFCYH DRDISPEYGT LAETNAKFDE 120 VIDYIEEKMK ADPTKKLLWG TAKCFDHPRY MHGAGTAPSA DVFAYAAAQI KKAVDSTVRL 180 GGQGYVFWGG REGYETLLNT NMALEQDNMA RLMKMTVDYA RSIGYTGDFY IEPKPKEPTK 240 HQYDFDTATV LGFLRKYGLD KDFKMNIEAN HATLAQHTFQ HELRVARDNG VFGSIDANQG 300 DPLLGWDTDQ FPTNAYDATL CMYEVLKAGG FTNGGLNFDA KARRGSFTHE DIFLSYIAGM 360 DTFALGLKAA AKLIEDGRID KFVDDRYASW NSGIGADIIA GKVGMADLEK YALEKGEVTD 420 SLTSGRQEYL ESVVNQVMFN L 441
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44398-F1-model_v4 | 1 | 440 | 1 | 439 | 0.9772 |
0.9847 |
| AF-P00944-F1-model_v4 | 1 | 441 | 1 | 440 | 0.9747 |
0.9816 |
| AF-A0A0H3H006-F1-model_v4 | 1 | 441 | 1 | 440 | 0.9746 |
0.9815 |
| AF-A0A0H3GR15-F1-model_v4 | 1 | 440 | 1 | 439 | 0.9743 |
0.9822 |
| AF-Q8ZL90-F1-model_v4 | 1 | 441 | 1 | 440 | 0.9739 |
0.9809 |
| AF-Q9FKK7-F1-model_v4 | 1 | 438 | 42 | 477 | 0.9346 |
0.9867 |
| AF-I1MSU1-F1-model_v4 | 1 | 438 | 45 | 480 | 0.9297 |
0.9848 |
| AF-Q8H3Q7-F1-model_v4 | 1 | 438 | 44 | 479 | 0.9288 |
0.9831 |
| AF-A0A1D6F3V1-F1-model_v4 | 1 | 438 | 47 | 493 | 0.9183 |
0.9805 |
| AF-A0A1D6ING2-F1-model_v4 | 1 | 438 | 49 | 494 | 0.9145 |
0.9778 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1a0d-assembly1.cif.gz_A | 3 | 441 | 1 | 436 | 0.9773 |
0.9888 |
| 1a0c-assembly1.cif.gz_A | 2 | 440 | 1 | 437 | 0.9754 |
0.9851 |
| 6t8f-assembly1.cif.gz_D | 1 | 438 | 1 | 436 | 0.9725 |
0.9836 |
| 5nh4-assembly1.cif.gz_C | 1 | 438 | 1 | 436 | 0.9717 |
0.9829 |
| 4xkm-assembly2.cif.gz_E | 2 | 438 | 1 | 435 | 0.9713 |
0.9835 |
| 1a0e-assembly1.cif.gz_A | 2 | 441 | 1 | 438 | 0.9707 |
0.9847 |
| 6int-assembly1.cif.gz_B | 5 | 441 | 1 | 412 | 0.9449 |
0.9825 |
| 1bxb-assembly1.cif.gz_D | 15 | 441 | 1 | 387 | 0.8467 |
0.9142 |
| 1bxc-assembly1.cif.gz_A | 15 | 441 | 1 | 387 | 0.8467 |
0.9142 |
| 1xyb-assembly1.cif.gz_A | 15 | 441 | 1 | 386 | 0.8443 |
0.9123 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9S306-F1-model_v4 | 2 | 441 | 1 | 438 | 0.9906 |
0.9973 |
| AF-B9MPG8-F1-model_v4 | 2 | 441 | 1 | 438 | 0.9828 |
0.9904 |
| AF-Q9KGU2-F1-model_v4 | 2 | 441 | 1 | 438 | 0.9819 |
0.9896 |
| AF-P19148-F1-model_v4 | 1 | 441 | 1 | 439 | 0.9818 |
0.9886 |
| AF-B0K1L3-F1-model_v4 | 2 | 441 | 1 | 438 | 0.9813 |
0.9892 |
| AF-P22842-F1-model_v4 | 2 | 441 | 1 | 438 | 0.9813 |
0.9891 |
| AF-Q7UVG2-F1-model_v4 | 2 | 441 | 1 | 439 | 0.9808 |
0.9877 |
| AF-P30435-F1-model_v4 | 1 | 441 | 1 | 439 | 0.9803 |
0.9873 |
| AF-P29441-F1-model_v4 | 1 | 441 | 1 | 439 | 0.9801 |
0.9871 |
| AF-Q7C3R3-F1-model_v4 | 2 | 439 | 1 | 435 | 0.9792 |
0.9906 |