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Cluster: HRGMv2_4550_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4550_1 HRGMv2_4550_1_100 102777 105530 + 8.A.59.2.1
TC HRGMv2_4550_1 HRGMv2_4550_1_101 105706 106677 + 3.A.1.1.10
TC HRGMv2_4550_1 HRGMv2_4550_1_102 106696 107562 + 3.A.1.1.10
TC HRGMv2_4550_1 HRGMv2_4550_1_103 107592 109205 + 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_4550_1 HRGMv2_4550_1_104 109271 109756 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4550_1 HRGMv2_4550_1_105 109753 111528 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4550_1 HRGMv2_4550_1_106 111635 112738 + 9.A.28.1.2
TF HRGMv2_4550_1 HRGMv2_4550_1_107 112847 113620 - HTH_3
peptidase HRGMv2_4550_1 HRGMv2_4550_1_108 113559 114473 - A36.UPW
CAZyme HRGMv2_4550_1 HRGMv2_4550_1_109 114795 116069 + GH3
Gene ID: HRGMv2_4550_1_100
Type: TC
Location: 102777 - 105530 (+)
Gene ID: HRGMv2_4550_1_101
Type: TC
Location: 105706 - 106677 (+)
Gene ID: HRGMv2_4550_1_102
Type: TC
Location: 106696 - 107562 (+)
Gene ID: HRGMv2_4550_1_103
Type: TC
Location: 107592 - 109205 (+)
Gene ID: HRGMv2_4550_1_104
Type:
Location: 109271 - 109756 (+)
Gene ID: HRGMv2_4550_1_105
Type:
Location: 109753 - 111528 (+)
Gene ID: HRGMv2_4550_1_106
Type: TC
Location: 111635 - 112738 (+)
Gene ID: HRGMv2_4550_1_107
Type: TF
Location: 112847 - 113620 (-)
Gene ID: HRGMv2_4550_1_108
Type: peptidase
Location: 113559 - 114473 (-)
Gene ID: HRGMv2_4550_1_109
Type: CAZyme
Location: 114795 - 116069 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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