PROTEIN: HRGMv2_4550_1_105
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Protein File & Metadata
Source:
HRGMv2_4550_1_105.pdb
Genome ID:
Protein ID:
HRGMv2_4550_1_105
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Detailed structural information will appear here after analysis...
Protein Sequence
MKLYLISDYC RIDGETADFA EKEFRGDFTK CDAEISLFSA RNQMVSFQLV AEMENGETLT 60 DFDLSFTPLT GPTGSIPADY EVFIEWFHRI EGAFLPDMLL PYGKCSLDFR VPLEPEYHAG 120 QKAGALWIDL FVPEAARKGR YEGTLRVRAN QTEKEFSIRL KVYSCMVPYE SRIIADLNNY 180 ADNISPSYPS LAQNPDRYRD GSYLAVERQF FTMAREHRCL FQNLNYLHSG KPVESFAPEL 240 TGSGKTIRVK DWTLFDEHFG PYLDGSAFKG SRRGAMPVEF MFTPFNLGWP ASLSKWGEKG 300 FKTEYRRILW EFTRHFEEKG WTSTNMEIMF NHKKEYRFLP STQDEIWYEH DEEILDYMAD 360 VMQDITPHSS AKFVFRADSS NHYGDHSEKY ADLFQMWVSA MTMYAWYPER VQIAKNHGSI 420 LWIYGWYGEG MTIDLPLNAF LTQPMICFMT GATGFCSFWN AVGWGDSYKK MPFVNAGQSL 480 FYPGFEFGAG DVLPSLRMKV LRNQMQLADL MMTTDGLDVE AFDYQRRDLE QAVNECFGYA 540 DNSAWWKETP PFADTPPRYW KYGEEVTLNH YKGRSPKIID DLRRRVYRRL G 591
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7XI89-F1-model_v4 | 1 | 591 | 61 | 657 | 0.6831 |
0.7298 |
| AF-Q7Y231-F1-model_v4 | 1 | 591 | 46 | 641 | 0.6808 |
0.7205 |
| AF-I1JTC6-F1-model_v4 | 1 | 591 | 52 | 648 | 0.6783 |
0.7206 |
| AF-I1K7S9-F1-model_v4 | 1 | 591 | 52 | 648 | 0.6772 |
0.7195 |
| AF-A0A1D6EZK5-F1-model_v4 | 1 | 591 | 60 | 662 | 0.6588 |
0.7065 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3Q8XA24-F1-model_v4 | GH0 | 1 | 591 | 1 | 525 | 0.7638 |
0.823 |
| AF-A0A0K3B029-F1-model_v4 | GH0 | 1 | 591 | 31 | 559 | 0.7613 |
0.8388 |
| UUX35274.1 | GH0 | 1 | 591 | 1 | 543 | 0.7596 |
0.8053 |
| UKS29316.1 | GH0 | 1 | 591 | 1 | 530 | 0.7594 |
0.8217 |
| BDG05273.1 | GH0 | 1 | 591 | 25 | 563 | 0.7572 |
0.826 |
| QTR47445.1 | GH0 | 1 | 591 | 30 | 592 | 0.7533 |
0.8039 |
| AF-A0A3G9JJ97-F1-model_v4 | GH0 | 1 | 591 | 2 | 546 | 0.7527 |
0.8007 |
| AF-A0A8B0SH25-F1-model_v4 | GH0 | 1 | 591 | 29 | 592 | 0.7524 |
0.802 |
| WEG35440.1 | GH0 | 1 | 591 | 4 | 545 | 0.7516 |
0.8001 |
| AF-A0A089IHD6-F1-model_v4 | GH0 | 1 | 591 | 7 | 549 | 0.7506 |
0.8018 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| S0F579 | GH123 | 1 | 591 | 28 | 564 | 0.7476 |
0.8155 |
| A0A5C0ZM84 | GH123 | 1 | 591 | 31 | 556 | 0.7449 |
0.8221 |
| F4A0V3 | GH123 | 1 | 591 | 4 | 584 | 0.7419 |
0.7665 |
| A0A4V6KBJ1 | GH123 | 1 | 591 | 2 | 575 | 0.7417 |
0.7684 |
| A0A125V874 | GH123 | 1 | 591 | 3 | 580 | 0.7408 |
0.7665 |
| A0A3G9E743 | GH123 | 1 | 591 | 42 | 578 | 0.7399 |
0.8156 |
| A0A378XAC6 | GH123 | 1 | 591 | 1 | 577 | 0.7377 |
0.7632 |
| QYX26352.1 | GH123 | 1 | 591 | 2 | 558 | 0.7372 |
0.7781 |
| A0A4D7CTK1 | GH123 | 1 | 591 | 1 | 546 | 0.7368 |
0.7817 |
| A0A5P8M8V9 | GH123 | 2 | 591 | 1 | 557 | 0.7367 |
0.7761 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5fqe-assembly2.cif.gz_B | 1 | 591 | 3 | 573 | 0.7403 |
0.7737 |
| 5fqh-assembly1.cif.gz_A | 1 | 591 | 3 | 573 | 0.7368 |
0.7717 |
| 5fr0-assembly1.cif.gz_A | 1 | 591 | 2 | 569 | 0.7359 |
0.7712 |
| 5l7v-assembly1.cif.gz_B | 1 | 589 | 25 | 562 | 0.735 |
0.7991 |
| 5l7u-assembly1.cif.gz_A | 1 | 589 | 26 | 554 | 0.733 |
0.8044 |
| 5l7u-assembly1.cif.gz_B | 1 | 589 | 26 | 561 | 0.7326 |
0.7984 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.