Cluster: HRGMv2_4545_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4545
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4545_3 | HRGMv2_4545_3_28 | 26434 | 29574 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4545_3 | HRGMv2_4545_3_29 | 29592 | 30317 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4545_3 | HRGMv2_4545_3_30 | 30314 | 30790 | - | Big_2 |
| CAZyme | HRGMv2_4545_3 | HRGMv2_4545_3_31 | 30762 | 31895 | - | GT4 |
| TC | HRGMv2_4545_3 | HRGMv2_4545_3_32 | 31882 | 32610 | - | 3.A.1.103.1 |
| TC | HRGMv2_4545_3 | HRGMv2_4545_3_33 | 32630 | 33406 | - | 3.A.1.103.6 |
| CAZyme | HRGMv2_4545_3 | HRGMv2_4545_3_34 | 33403 | 34218 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4545_3 | HRGMv2_4545_3_35 | 34220 | 35515 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4545_3 | HRGMv2_4545_3_36 | 35529 | 36671 | - | EpsG |
| TC | HRGMv2_4545_3 | HRGMv2_4545_3_37 | 36649 | 38070 | - | 9.B.18.1.1 |
| NULL(UNKNOWN) | HRGMv2_4545_3 | HRGMv2_4545_3_38 | 38240 | 38914 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4545_3 | HRGMv2_4545_3_39 | 39253 | 39777 | - | 9.B.156.3.1 |
| TC | HRGMv2_4545_3 | HRGMv2_4545_3_40 | 39770 | 40354 | - | 9.B.156.3.1 |
Gene ID: HRGMv2_4545_3_28
Type: CAZyme
Location: 26434 - 29574 (-)
Type: CAZyme
Location: 26434 - 29574 (-)
Gene ID: HRGMv2_4545_3_29
Type:
Location: 29592 - 30317 (-)
Type:
Location: 29592 - 30317 (-)
Gene ID: HRGMv2_4545_3_30
Type: pfam
Location: 30314 - 30790 (-)
Type: pfam
Location: 30314 - 30790 (-)
Gene ID: HRGMv2_4545_3_31
Type: CAZyme
Location: 30762 - 31895 (-)
Type: CAZyme
Location: 30762 - 31895 (-)
Gene ID: HRGMv2_4545_3_32
Type: TC
Location: 31882 - 32610 (-)
Type: TC
Location: 31882 - 32610 (-)
Gene ID: HRGMv2_4545_3_33
Type: TC
Location: 32630 - 33406 (-)
Type: TC
Location: 32630 - 33406 (-)
Gene ID: HRGMv2_4545_3_34
Type: CAZyme
Location: 33403 - 34218 (-)
Type: CAZyme
Location: 33403 - 34218 (-)
Gene ID: HRGMv2_4545_3_35
Type:
Location: 34220 - 35515 (-)
Type:
Location: 34220 - 35515 (-)
Gene ID: HRGMv2_4545_3_36
Type: pfam
Location: 35529 - 36671 (-)
Type: pfam
Location: 35529 - 36671 (-)
Gene ID: HRGMv2_4545_3_37
Type: TC
Location: 36649 - 38070 (-)
Type: TC
Location: 36649 - 38070 (-)
Gene ID: HRGMv2_4545_3_38
Type:
Location: 38240 - 38914 (-)
Type:
Location: 38240 - 38914 (-)
Gene ID: HRGMv2_4545_3_39
Type: TC
Location: 39253 - 39777 (-)
Type: TC
Location: 39253 - 39777 (-)
Gene ID: HRGMv2_4545_3_40
Type: TC
Location: 39770 - 40354 (-)
Type: TC
Location: 39770 - 40354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp019422525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.