PROTEIN: HRGMv2_4545_3_38
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Protein File & Metadata
Source:
HRGMv2_4545_3_38.pdb
Genome ID:
Protein ID:
HRGMv2_4545_3_38
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Protein Sequence
MKKLCKKMIS AAVALSMAAV MGLSAMAVTA GYSDYGKSDV KDVVAGQKVE LVAQGQGADG 60 STMATGVKVE IPAGVLPAGV TKVSMEVTGV ENAKVQKALE NAANMGYSDV KVLDISLKDQ 120 NGDSISGLNG HVTVTVPASG KQNAVLYFAD NNSVTDMKAS LSGGYLTFET NHFSYYAAAF 180 QSEAASGTPQ TGDSSTTLVV IAVMSVAALA VLAASIKAKK ANVR 224
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8MNE2-F1-model_v4 | 27 | 184 | 421 | 591 | 0.3575 |
0.7535 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A859FIN9 | CBM41 , CBM48 , GH13_12 , GH13_41 | 3 | 196 | 71 | 2131 | 0.3249 |
0.6879 |
| AF-A0A7G1ITJ9-F1-model_v4 | GH33 | 7 | 182 | 198 | 607 | 0.318 |
0.603 |
| A0A410WZT2 | CBM32 , GH20 | 36 | 220 | 1206 | 1440 | 0.309 |
0.651 |
| A0A6M0L931 | GH2 | 1 | 224 | 1035 | 2230 | 0.305 |
0.57 |
| A0A8T8I8W1 | CBM32 , GH31 | 6 | 182 | 1763 | 2057 | 0.2816 |
0.6417 |
| A0A6M0LBK9 | GH123 | 40 | 182 | 2774 | 2905 | 0.2712 |
0.8419 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A859FIN9 | CBM41 , CBM48 , GH13_12 , GH13_41 | 3 | 196 | 71 | 2131 | 0.3249 |
0.6879 |
| A0A410WZT2 | CBM32 , GH20 | 36 | 220 | 1206 | 1440 | 0.309 |
0.651 |
| A0A6M0L931 | GH2 | 1 | 224 | 1035 | 2230 | 0.305 |
0.57 |
| A0A7T3T1E1 | CBM32 , GH101 | 1 | 182 | 1779 | 2008 | 0.2927 |
0.6535 |
| A0A8T8I8W1 | CBM32 , GH31 | 6 | 182 | 1763 | 2057 | 0.2816 |
0.6417 |
| A0A7T3VZT1 | CBM32 , CBM40 , GH33 | 16 | 222 | 1685 | 1883 | 0.2805 |
0.5719 |
| A0A6M0LBK9 | GH123 | 40 | 182 | 2774 | 2905 | 0.2712 |
0.8419 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.