PROTEIN: HRGMv2_4545_3_35
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Protein File & Metadata
Source:
HRGMv2_4545_3_35.pdb
Genome ID:
Protein ID:
HRGMv2_4545_3_35
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Protein Sequence
MEPMVLWRKT HRLLCEAGER ALCRCGGQGA AEETAARVTA PVLYGFCRWV LGTAQKRGWK 60 RLYFLARDGW VLRQICEELC RQEGWDTDCR YLYVSRLALR KACFHLTRDW EQLFQPSLHT 120 TLRGILSRMG LDAGRFGEWG LEKEELDKPL LREELFEMQK RLSQNDAFSK AVLSVSEEAF 180 KPAMGYFEQE GLLDGEKIVL VDTGWTGSMQ RTLRILLESG GWKGEISGLY FGLYVPPVSV 240 ADGEYQSWYF APESSAGRKA SLCNNVVEAM CAAPHGMTLG YEEKNGRWEP VLAQSRGSRQ 300 AIFRRRDIVL AFCREMQGLC CPEEELLACA RRMMGKLCKN PSVSQALAFA GVLFCDDVGE 360 GYLSPLAVPV SRRVLREYTV FRRLKKGKKP KPLFWPEGCL ALSPVKWQGW YRLNLYGWEL 420 LRQLYQKRQG K 431
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 412 | 213 | 631 | 0.671 |
0.8398 |
| AF-Q0P8I2-F1-model_v4 | 4 | 422 | 586 | 975 | 0.4818 |
0.7494 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 428 | 232 | 1067 | 0.6034 |
0.8686 |
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 429 | 272 | 1091 | 0.6027 |
0.8714 |
| A0A1I7GMF6 | GT2 | 1 | 424 | 270 | 1083 | 0.5999 |
0.8749 |
| A0A974WXG9 | GT4 | 4 | 418 | 651 | 1077 | 0.5885 |
0.8793 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 27 | 421 | 9 | 403 | 0.5732 |
0.7641 |
| A0A9J7AXY3 | GT2 | 27 | 424 | 7 | 399 | 0.561 |
0.786 |
| QRK05458.1 | GT4 | 2 | 429 | 244 | 988 | 0.5603 |
0.8302 |
| V4JBH5 | GT2 | 26 | 421 | 2 | 398 | 0.5561 |
0.782 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 21 | 421 | 3 | 405 | 0.5558 |
0.7834 |
| AF-M4S1R1-F1-model_v4 | GT4 | 2 | 417 | 213 | 699 | 0.5455 |
0.8009 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 1 | 428 | 232 | 1067 | 0.6034 |
0.8686 |
| A0A1I7GMF6 | GT2 | 1 | 424 | 270 | 1083 | 0.5999 |
0.8749 |
| A0A974WXG9 | GT4 | 4 | 418 | 651 | 1077 | 0.5885 |
0.8793 |
| A0A0U5F758 | GT2 | 27 | 421 | 9 | 403 | 0.5732 |
0.7641 |
| A0A9J7AXY3 | GT2 | 27 | 424 | 7 | 399 | 0.561 |
0.786 |
| QRK05458.1 | GT4 | 2 | 429 | 244 | 988 | 0.5603 |
0.8302 |
| V4JBH5 | GT2 | 26 | 421 | 2 | 398 | 0.5561 |
0.782 |
| A0A0H3KC95 | GT2 | 21 | 421 | 3 | 405 | 0.5558 |
0.7834 |
| M4S1R1 | GT4 | 2 | 417 | 213 | 699 | 0.5455 |
0.8009 |
| A6M2M4 | GT2 | 4 | 431 | 220 | 916 | 0.5405 |
0.8299 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 5 | 352 | 238 | 591 | 0.5847 |
0.8332 |
| 8a0m-assembly1.cif.gz_B | 2 | 417 | 470 | 876 | 0.5628 |
0.8236 |
| 8a0c-assembly1.cif.gz_A | 2 | 417 | 608 | 1028 | 0.5572 |
0.8338 |
| 8a0m-assembly2.cif.gz_C | 2 | 417 | 604 | 1024 | 0.5568 |
0.8324 |
| 8a0m-assembly1.cif.gz_A | 2 | 417 | 603 | 1023 | 0.5566 |
0.8315 |
| 8a0c-assembly1.cif.gz_B | 2 | 414 | 608 | 1026 | 0.549 |
0.8264 |
| 8a0m-assembly2.cif.gz_D | 2 | 417 | 499 | 887 | 0.5312 |
0.8126 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.