Cluster: HRGMv2_4536_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4536
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4536_45 | HRGMv2_4536_45_17 | 21908 | 22639 | + | 3.A.1.103.4 |
| NULL(UNKNOWN) | HRGMv2_4536_45 | HRGMv2_4536_45_18 | 22680 | 24476 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4536_45 | HRGMv2_4536_45_19 | 25213 | 26151 | + | GT2 |
Gene ID: HRGMv2_4536_45_17
Type: TC
Location: 21908 - 22639 (+)
Type: TC
Location: 21908 - 22639 (+)
Gene ID: HRGMv2_4536_45_18
Type:
Location: 22680 - 24476 (+)
Type:
Location: 22680 - 24476 (+)
Gene ID: HRGMv2_4536_45_19
Type: CAZyme
Location: 25213 - 26151 (+)
Type: CAZyme
Location: 25213 - 26151 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.