PROTEIN: HRGMv2_4536_45_18
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Protein File & Metadata
Source:
HRGMv2_4536_45_18.pdb
Genome ID:
Protein ID:
HRGMv2_4536_45_18
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Protein Sequence
MRVSKSWRTL VASKRFDGLV YFALFAILLI QLIKLGDKPG LYFDAMYPDY IGVQYLFPQQ 60 YYVRSQAAEP WLCQIYHGNI GVWITLLSVL ITGTTSILQH HIVYGIFAAA CVGMLYSILT 120 HRRVGVPKEL AAAAVLVFTV WPCLWTVVIT QYYMSLAGSL CVLGCARLYL SYLETPDHHT 180 KLIAGWFLLG VSFYTYFCFL FFVPAFLVAT WRVLPRHDWK ATLDRLILCL ISYLFGCAFY 240 LIGYTQIALY KAGYSLQNLQ KFLLFVVFYS LLLLMYELFR RRVSLRYGVL GAGLVVCAVW 300 AVKVLPYLAS NAESLQVMGA EPASLVQKVA HIFNDFSYLI SVLSTQRLIL GYDIIAWDNQ 360 KIWLFWLVLT VVTFLMERIS KRKSLPWKAL FMVWGSYLLC CVAFGSRMQP QHYVPLTFVM 420 VGLVACQMSS LYTSVTVLGK KAAARNARIV GVVFTAVLLL VSAVDSTRIL QEIRVTGGNG 480 RFTSQLTQLA YDALENAEQG EKELYLFPDW GFFTGFDYLT RNSIPFQGNL DEEVSGSYFA 540 DGGNLVLCCW EKEDVAQYEA FLHKVMGSQT GSIVTEEKYN PNGSLAFYKL TLSHDAEL 598
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0R0GSP5-F1-model_v4 | 1 | 594 | 24 | 542 | 0.6952 |
0.7741 |
| AF-A0A0K0DXE0-F1-model_v4 | 17 | 593 | 1 | 492 | 0.692 |
0.773 |
| AF-Q54PM5-F1-model_v4 | 12 | 593 | 8 | 547 | 0.6917 |
0.7465 |
| AF-G5EDN2-F1-model_v4 | 14 | 596 | 1 | 496 | 0.687 |
0.7658 |
| AF-D3ZYY8-F1-model_v4 | 1 | 598 | 30 | 537 | 0.6813 |
0.7741 |
| AF-Q7SXZ1-F1-model_v4 | 2 | 598 | 22 | 530 | 0.6787 |
0.7659 |
| AF-A0A0K0EAE5-F1-model_v4 | 14 | 596 | 1 | 493 | 0.6785 |
0.76 |
| AF-Q94A15-F1-model_v4 | 2 | 597 | 23 | 548 | 0.6767 |
0.749 |
| AF-Q9JJQ0-F1-model_v4 | 1 | 598 | 32 | 537 | 0.6754 |
0.7704 |
| AF-A0A158N873-F1-model_v4 | 16 | 598 | 2 | 496 | 0.6734 |
0.755 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 1 | 595 | 2 | 502 | 0.7169 |
0.7978 |
| UUI66023.1 | GT83 | 5 | 597 | 15 | 509 | 0.7164 |
0.8083 |
| AF-A0A1D9LKM3-F1-model_v4 | GT83 | 17 | 598 | 10 | 489 | 0.7161 |
0.8158 |
| AF-A0A5C1DCK1-F1-model_v4 | GT83 | 16 | 598 | 9 | 489 | 0.7144 |
0.8124 |
| AF-A0A2H5DYZ9-F1-model_v4 | GT83 | 13 | 598 | 7 | 489 | 0.7138 |
0.8085 |
| AF-A0A2R2WBG4-F1-model_v4 | GT83 | 9 | 598 | 1 | 490 | 0.7125 |
0.7976 |
| AF-A0A518N6I7-F1-model_v4 | GT83 | 4 | 598 | 1 | 500 | 0.7123 |
0.7906 |
| AF-A0A344ULM0-F1-model_v4 | GT83 | 16 | 598 | 9 | 491 | 0.7123 |
0.8119 |
| AF-A0A1B1BQ47-F1-model_v4 | GT83 | 2 | 598 | 2 | 510 | 0.7116 |
0.7859 |
| A0A3M4VJW3 | GT83 | 9 | 595 | 1 | 488 | 0.7111 |
0.8022 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| I4BYW5 | GT83 | 5 | 598 | 1 | 495 | 0.7293 |
0.8129 |
| A0A0K1PEQ4 | GT83 | 5 | 598 | 1 | 488 | 0.7244 |
0.8132 |
| A0A2Z4Y6P6 | GT83 | 6 | 595 | 1 | 495 | 0.7241 |
0.807 |
| A0A0S2K4T4 | GT83 | 12 | 598 | 1 | 482 | 0.7211 |
0.8125 |
| A0A1C1W1J0 | GT83 | 13 | 598 | 5 | 508 | 0.7205 |
0.8003 |
| UUI66023.1 | GT83 | 5 | 597 | 15 | 509 | 0.7164 |
0.8083 |
| A0A0F7XTI1 | GT83 | 6 | 598 | 1 | 473 | 0.716 |
0.814 |
| A0A518AYL4 | GT83 | 5 | 595 | 1 | 483 | 0.7132 |
0.8094 |
| C1D745 | GT83 | 19 | 598 | 10 | 481 | 0.7121 |
0.8166 |
| A0A1B1BQ47 | GT83 | 2 | 598 | 2 | 510 | 0.7116 |
0.7859 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6gxc-assembly1.cif.gz_A | 8 | 594 | 9 | 706 | 0.5941 |
0.6673 |
| 5ogl-assembly1.cif.gz_A | 8 | 594 | 9 | 707 | 0.5935 |
0.6678 |
| 7oci-assembly1.cif.gz_F | 3 | 594 | 1 | 605 | 0.5818 |
0.6236 |
| 6ezn-assembly1.cif.gz_F | 3 | 595 | 1 | 616 | 0.5807 |
0.6257 |
| 8agc-assembly1.cif.gz_A | 3 | 594 | 1 | 663 | 0.5741 |
0.6375 |
| 8b6l-assembly1.cif.gz_I | 4 | 594 | 1 | 676 | 0.5718 |
0.6316 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 12 | 594 | 1 | 467 | 0.6789 |
0.7812 |
| AF-Q7SXZ1-F1-model_v4 | 2 | 598 | 22 | 530 | 0.6787 |
0.7659 |
| AF-Q1MJ96-F1-model_v4 | 12 | 594 | 4 | 494 | 0.6773 |
0.7655 |
| AF-Q4V7R2-F1-model_v4 | 4 | 595 | 33 | 531 | 0.6771 |
0.7742 |
| AF-Q94A15-F1-model_v4 | 2 | 597 | 23 | 548 | 0.6767 |
0.749 |
| AF-Q9JJQ0-F1-model_v4 | 1 | 598 | 32 | 537 | 0.6754 |
0.7704 |
| AF-Q1LZA0-F1-model_v4 | 5 | 598 | 35 | 538 | 0.6725 |
0.7689 |
| AF-Q92521-F1-model_v4 | 1 | 598 | 38 | 548 | 0.6682 |
0.7629 |
| AF-Q6CU99-F1-model_v4 | 20 | 595 | 4 | 504 | 0.6678 |
0.7443 |
| AF-Q9USN0-F1-model_v4 | 16 | 595 | 1 | 506 | 0.6646 |
0.7353 |