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Cluster: HRGMv2_4534_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4534_23 HRGMv2_4534_23_11 16320 19043 + 8.A.59.2.1
TC HRGMv2_4534_23 HRGMv2_4534_23_12 19457 20392 + 3.A.1.1.10
TC HRGMv2_4534_23 HRGMv2_4534_23_13 20413 21273 + 3.A.1.1.10
TC HRGMv2_4534_23 HRGMv2_4534_23_14 21302 22927 + 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_4534_23 HRGMv2_4534_23_15 22992 23477 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4534_23 HRGMv2_4534_23_16 23474 25252 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4534_23 HRGMv2_4534_23_17 25329 26411 + CE19
pfam HRGMv2_4534_23 HRGMv2_4534_23_18 26511 27440 + ApbA | ApbA_C
NULL(UNKNOWN) HRGMv2_4534_23 HRGMv2_4534_23_19 28196 30085 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4534_23 HRGMv2_4534_23_20 30089 31174 - GT2
TC HRGMv2_4534_23 HRGMv2_4534_23_21 31588 32658 - 2.A.66.1.25
pfam HRGMv2_4534_23 HRGMv2_4534_23_22 32695 32955 - MatE
TC HRGMv2_4534_23 HRGMv2_4534_23_23 34221 35642 - 3.A.1.18.3
TC HRGMv2_4534_23 HRGMv2_4534_23_24 35639 36316 - 3.A.1.18.3
TC HRGMv2_4534_23 HRGMv2_4534_23_25 36313 36882 - 3.A.1.18.3
NULL(UNKNOWN) HRGMv2_4534_23 HRGMv2_4534_23_26 36848 37150 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4534_23 HRGMv2_4534_23_27 37969 38766 - 3.A.1.34.1
TC HRGMv2_4534_23 HRGMv2_4534_23_28 38763 39122 - 3.A.1.34.1
Gene ID: HRGMv2_4534_23_11
Type: TC
Location: 16320 - 19043 (+)
Gene ID: HRGMv2_4534_23_12
Type: TC
Location: 19457 - 20392 (+)
Gene ID: HRGMv2_4534_23_13
Type: TC
Location: 20413 - 21273 (+)
Gene ID: HRGMv2_4534_23_14
Type: TC
Location: 21302 - 22927 (+)
Gene ID: HRGMv2_4534_23_15
Type:
Location: 22992 - 23477 (+)
Gene ID: HRGMv2_4534_23_16
Type:
Location: 23474 - 25252 (+)
Gene ID: HRGMv2_4534_23_17
Type: CAZyme
Location: 25329 - 26411 (+)
Gene ID: HRGMv2_4534_23_18
Type: pfam
Location: 26511 - 27440 (+)
Gene ID: HRGMv2_4534_23_19
Type:
Location: 28196 - 30085 (-)
Gene ID: HRGMv2_4534_23_20
Type: CAZyme
Location: 30089 - 31174 (-)
Gene ID: HRGMv2_4534_23_21
Type: TC
Location: 31588 - 32658 (-)
Gene ID: HRGMv2_4534_23_22
Type: pfam
Location: 32695 - 32955 (-)
Gene ID: HRGMv2_4534_23_23
Type: TC
Location: 34221 - 35642 (-)
Gene ID: HRGMv2_4534_23_24
Type: TC
Location: 35639 - 36316 (-)
Gene ID: HRGMv2_4534_23_25
Type: TC
Location: 36313 - 36882 (-)
Gene ID: HRGMv2_4534_23_26
Type:
Location: 36848 - 37150 (-)
Gene ID: HRGMv2_4534_23_27
Type: TC
Location: 37969 - 38766 (-)
Gene ID: HRGMv2_4534_23_28
Type: TC
Location: 38763 - 39122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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