PROTEIN: HRGMv2_4534_23_16
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Protein File & Metadata
Source:
HRGMv2_4534_23_16.pdb
Genome ID:
Protein ID:
HRGMv2_4534_23_16
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Detailed structural information will appear here after analysis...
Protein Sequence
MKAFLIGDYC RIDGLTGEFA EKDYAADLKT FDREISLHSA RNQMVSFQLA VVVDGEEQLK 60 DFEIEFSPLV NEAGRIEPDY EVFIEWFHQI GKQLIPDMLI PYGTPGAEFC IPLSEEYHAG 120 QRAGALWIDL FVPEVARKGN YEGEVTVRLN DSMVKFVVRL KVESCMVPYE SRIIADLNNY 180 ADNISPNYPR LAANPQRYRD GSYFEIEKQF ITLAREHRCL FQNLNYLHSG RPVESFAPEL 240 EGEGKNIRVK SWELFDRHFG PYLDGSAFAG SRRGELPIEF MFTPFNLGWP ADYTKWGEPG 300 FKTEYKRILW EFLRHFEEKG WTKTVLEMMF NNKKEYRFFP TTQDEIWYFH DEEIVDQMYE 360 IVKDTFEHSP VKMVMRADSS NNYGNHYEKY ADVFGMWVAA MAMYSWFPES VLTMKNHRNI 420 LWIYGWYGEG MTIDLPLHAF LTQPMICFMT GATGFCSFWN TLSWGKDYLK TPFVNGGQGF 480 FYPGDGFHAG DVLPSLRMKV LRNQMQLADL MMTTEGLDVE TPHPMRKELE EIVNQCFGYQ 540 GMEDWWNEKP PYLNTPPRYW NFEDKSLKKN HYENQSPILI DRLRNRVLDY LG 592
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7XI89-F1-model_v4 | 1 | 592 | 61 | 657 | 0.6824 |
0.7285 |
| AF-Q7Y231-F1-model_v4 | 1 | 592 | 46 | 641 | 0.68 |
0.7192 |
| AF-I1JTC6-F1-model_v4 | 1 | 592 | 52 | 648 | 0.6774 |
0.7192 |
| AF-I1K7S9-F1-model_v4 | 1 | 592 | 52 | 648 | 0.6763 |
0.7179 |
| AF-A0A1D6EZK5-F1-model_v4 | 1 | 592 | 60 | 662 | 0.6583 |
0.7055 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3Q8XA24-F1-model_v4 | GH0 | 1 | 592 | 1 | 525 | 0.7575 |
0.8171 |
| AF-A0A0K3B029-F1-model_v4 | GH0 | 1 | 592 | 31 | 559 | 0.7564 |
0.8344 |
| QTR47445.1 | GH0 | 1 | 592 | 30 | 592 | 0.755 |
0.8066 |
| AF-A0A8B0SH25-F1-model_v4 | GH0 | 1 | 592 | 30 | 592 | 0.7547 |
0.8059 |
| UUX35274.1 | GH0 | 1 | 592 | 1 | 543 | 0.7546 |
0.8013 |
| UKS29316.1 | GH0 | 1 | 592 | 1 | 530 | 0.7522 |
0.8151 |
| AF-A0A3G9JJ97-F1-model_v4 | GH0 | 1 | 592 | 2 | 546 | 0.749 |
0.7973 |
| AF-A0A089IHD6-F1-model_v4 | GH0 | 1 | 592 | 7 | 549 | 0.747 |
0.7986 |
| AF-A0A2S0KP00-F1-model_v4 | GH0 | 1 | 592 | 3 | 553 | 0.7461 |
0.7921 |
| AF-A0A2S0L124-F1-model_v4 | GH0 | 1 | 592 | 1 | 541 | 0.746 |
0.7936 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| S0F579 | GH123 | 1 | 592 | 28 | 564 | 0.743 |
0.8114 |
| A0A5C0ZM84 | GH123 | 1 | 592 | 31 | 556 | 0.74 |
0.8176 |
| F4A0V3 | GH123 | 1 | 592 | 4 | 584 | 0.738 |
0.7632 |
| A0A4V6KBJ1 | GH123 | 1 | 592 | 2 | 575 | 0.7365 |
0.7639 |
| A0A125V874 | GH123 | 1 | 592 | 3 | 580 | 0.7362 |
0.7626 |
| QYX26352.1 | GH123 | 1 | 592 | 3 | 558 | 0.7352 |
0.7777 |
| UUV17962.1 | GH123 | 1 | 592 | 3 | 569 | 0.735 |
0.768 |
| A0A3G9E743 | GH123 | 1 | 592 | 42 | 578 | 0.7347 |
0.8108 |
| A0A378XAC6 | GH123 | 1 | 592 | 1 | 579 | 0.7341 |
0.7584 |
| A0A1G4G8C8 | GH123 | 1 | 592 | 41 | 587 | 0.7335 |
0.8011 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5fqe-assembly2.cif.gz_B | 1 | 592 | 3 | 573 | 0.7348 |
0.769 |
| 5fqh-assembly1.cif.gz_A | 1 | 592 | 3 | 573 | 0.7316 |
0.7674 |
| 5fr0-assembly1.cif.gz_A | 1 | 592 | 2 | 569 | 0.7312 |
0.7669 |
| 5l7v-assembly1.cif.gz_B | 1 | 590 | 25 | 562 | 0.728 |
0.7924 |
| 5l7u-assembly1.cif.gz_A | 1 | 590 | 26 | 554 | 0.7256 |
0.7971 |
| 5l7u-assembly1.cif.gz_B | 1 | 590 | 26 | 561 | 0.7252 |
0.7913 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.