PROTEIN: HRGMv2_4534_23_19
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Protein File & Metadata
Source:
HRGMv2_4534_23_19.pdb
Genome ID:
Protein ID:
HRGMv2_4534_23_19
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Protein Sequence
MSTSLAGAIL VLFSGLLSVV FKRKIEEFFA VSVIVISLLL YIGGLFGSLS IGFYAVVALA 60 VLSVPALALL LVKRRQSWKL LATPGLLAFL LLLFIVWNGH RGRLFSRWDE FSHWGLVIKN 120 MFSLDQLGNA EQATTYFKGY PPLSSLFSYF WTKLSGAFHE TDAFRSSNMF LLCCLLPVFK 180 SVGWKHPGRI ISLFAVVLLF PLLFESEVYT SIYVDLLLGG VFCFALFSYF SSKNSPSTLL 240 MVSLSLLALP LIKASGTGLA AIVFLIIAVD ILFFRRKEKT CLKILWLAVP LFSLLAAKFS 300 WDIYLSLTST STAWDTSGVS SQGIVGIFTG NLEEYQLDTI ENFLNALADL SSYSFGYIVK 360 LPITVWLCLF FILAFFLAAA AKPEGQKSRF AACLIGVGGG LAVYLASLLV LYLFSFSPYE 420 AENLASLQRY ASTYIFGMFA FLLSMFIHRF SSSAQREWKW KMNVCYAALC FTLFNVNLSS 480 LYSITLLSGT TVTEARDTRS GAEISAPLLT KLNSETDKVY IISQNDNGFY YWISYYNFTP 540 VLAETEAWSL GEPYYDGDVW TSDLSPEEFA DILIESGYTH VYLYHVDEQF VGLYSSLFEA 600 PDKISSGSLY RVRQEGGTVQ LVWEASNFS 629
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD98-F1-model_v4 | 1 | 619 | 5 | 652 | 0.6433 |
0.6861 |
| AF-K0EN63-F1-model_v4 | 83 | 629 | 1 | 542 | 0.5814 |
0.6413 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518AYL4-F1-model_v4 | GT83 | 78 | 618 | 5 | 489 | 0.6276 |
0.727 |
| AF-A0A0F7XTI1-F1-model_v4 | GT83 | 24 | 629 | 1 | 473 | 0.6177 |
0.7192 |
| AF-Q1IIT8-F1-model_v4 | GT83 | 75 | 622 | 3 | 556 | 0.6038 |
0.6667 |
| AF-A0A6N4WDJ7-F1-model_v4 | GT85 | 17 | 614 | 2 | 613 | 0.6011 |
0.6418 |
| AF-A0A809GGF7-F1-model_v4 | GT85 | 16 | 620 | 10 | 629 | 0.6007 |
0.6421 |
| AF-A0A7H0JZ40-F1-model_v4 | GT85 | 18 | 613 | 6 | 614 | 0.6006 |
0.6427 |
| AF-R4UKZ7-F1-model_v4 | GT85 | 16 | 620 | 10 | 629 | 0.6005 |
0.6422 |
| AF-A0A4Y6IGV3-F1-model_v4 | GT85 | 16 | 620 | 10 | 629 | 0.6001 |
0.6414 |
| AF-L0J652-F1-model_v4 | GT85 | 16 | 614 | 1 | 617 | 0.5999 |
0.6414 |
| UAB91770.1 | GT89 | 23 | 608 | 4 | 534 | 0.5986 |
0.6741 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6C2YNQ2 | GT83 | 74 | 615 | 19 | 504 | 0.6299 |
0.7373 |
| A0A518AYL4 | GT83 | 78 | 618 | 5 | 489 | 0.6276 |
0.727 |
| A0A0F7XTI1 | GT83 | 24 | 629 | 1 | 473 | 0.6177 |
0.7192 |
| A0A127JPD6 | GT83 | 74 | 619 | 1 | 512 | 0.6168 |
0.7034 |
| Q1IIT8 | GT83 | 75 | 622 | 3 | 556 | 0.6038 |
0.6667 |
| A0A7H0JZ40 | GT85 | 18 | 613 | 6 | 614 | 0.6006 |
0.6427 |
| UAB91770.1 | GT89 | 23 | 608 | 4 | 534 | 0.5986 |
0.6741 |
| UYZ58515.1 | GT83 | 79 | 622 | 17 | 501 | 0.5862 |
0.6893 |
| A0A0N7F2F5 | GT85 | 17 | 613 | 36 | 660 | 0.5832 |
0.643 |
| Q1Q631 | GT83 | 79 | 620 | 60 | 529 | 0.5805 |
0.7154 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.