dbCAN Logo

Cluster: HRGMv2_4372_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4372_20 HRGMv2_4372_20_24 20813 21991 + GT4
NULL(UNKNOWN) HRGMv2_4372_20 HRGMv2_4372_20_25 21994 23058 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4372_20 HRGMv2_4372_20_26 23320 24321 + GT2
pfam HRGMv2_4372_20 HRGMv2_4372_20_27 24355 25893 + Polysacc_synt
pfam HRGMv2_4372_20 HRGMv2_4372_20_28 25897 26910 + PS_pyruv_trans
CAZyme HRGMv2_4372_20 HRGMv2_4372_20_29 26915 27874 + GT2
pfam HRGMv2_4372_20 HRGMv2_4372_20_30 28027 29499 + SLH
CAZyme HRGMv2_4372_20 HRGMv2_4372_20_31 29598 30413 + GT2
pfam HRGMv2_4372_20 HRGMv2_4372_20_32 30424 31290 + Metallophos
NULL(UNKNOWN) HRGMv2_4372_20 HRGMv2_4372_20_33 31309 32253 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4372_20 HRGMv2_4372_20_34 32287 34491 + 8.A.59.4.2
Gene ID: HRGMv2_4372_20_24
Type: CAZyme
Location: 20813 - 21991 (+)
Gene ID: HRGMv2_4372_20_25
Type:
Location: 21994 - 23058 (+)
Gene ID: HRGMv2_4372_20_26
Type: CAZyme
Location: 23320 - 24321 (+)
Gene ID: HRGMv2_4372_20_27
Type: pfam
Location: 24355 - 25893 (+)
Gene ID: HRGMv2_4372_20_28
Type: pfam
Location: 25897 - 26910 (+)
Gene ID: HRGMv2_4372_20_29
Type: CAZyme
Location: 26915 - 27874 (+)
Gene ID: HRGMv2_4372_20_30
Type: pfam
Location: 28027 - 29499 (+)
Gene ID: HRGMv2_4372_20_31
Type: CAZyme
Location: 29598 - 30413 (+)
Gene ID: HRGMv2_4372_20_32
Type: pfam
Location: 30424 - 31290 (+)
Gene ID: HRGMv2_4372_20_33
Type:
Location: 31309 - 32253 (+)
Gene ID: HRGMv2_4372_20_34
Type: TC
Location: 32287 - 34491 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List