PROTEIN: HRGMv2_4372_20_33
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Protein File & Metadata
Source:
HRGMv2_4372_20_33.pdb
Genome ID:
Protein ID:
HRGMv2_4372_20_33
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Detailed structural information will appear here after analysis...
Protein Sequence
MKYAWKDHKK FAFTIVDDTD GASVENIKPI YQYLYKKGII TTKTVWMYSP RDYFPGDSME 60 NEAYRDYVVG LQKQGYEIAL HDAGSGRFSG AEIKNALEEF REIFGSYPKM QINHGDNPSS 120 IYWCGKRFSP LLARLYNFYK KKKGAFVESE GDMPGKPAFW GDDCKAHIRY IRNRVYGELN 180 LLKCDPYTPY REKQKDVYSN YWFSSSDAMT ADLFVQLLSK RNIDRLVQQG GCAIVYTHFG 240 YGFVDEKTKK LRNDVKEVLD YLAEQDGWFA PASEILDTLL EQKHGNEYLS SWKSLKLDIR 300 WLAERVYRRL KSKV 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0ENC6-F1-model_v4 | 1 | 281 | 28 | 293 | 0.6171 |
0.7165 |
| AF-A0A0D2HM77-F1-model_v4 | 2 | 293 | 1 | 309 | 0.5885 |
0.6538 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A125Q0Q6-F1-model_v4 | CE4 | 1 | 292 | 21 | 312 | 0.6258 |
0.6871 |
| AF-A0A7R7YFI3-F1-model_v4 | CE4 | 1 | 288 | 18 | 304 | 0.6189 |
0.6829 |
| AF-A1WQW7-F1-model_v4 | CE4 | 1 | 288 | 30 | 313 | 0.6055 |
0.6836 |
| AF-A0A1D9BGS1-F1-model_v4 | CBM12 | 2 | 287 | 90 | 363 | 0.5162 |
0.6793 |
| AF-A0A0X8GRL4-F1-model_v4 | CBM5 | 1 | 288 | 30 | 410 | 0.5004 |
0.6561 |
| AF-A0A7S9C4R8-F1-model_v4 | CBM5 | 1 | 288 | 165 | 473 | 0.4892 |
0.6697 |
| AF-A0A250JA96-F1-model_v4 | CBM8 , CE0 | 1 | 299 | 29 | 292 | 0.4602 |
0.7012 |
| AF-E1R6M3-F1-model_v4 | GH57 | 2 | 313 | 1 | 452 | 0.4588 |
0.6349 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A518WIP2 | CE4 | 1 | 294 | 21 | 312 | 0.6258 |
0.6871 |
| ULQ60020.1 | GH57 | 1 | 314 | 1 | 284 | 0.6062 |
0.6715 |
| A0A7S9C4R8 | CBM5 | 1 | 288 | 165 | 473 | 0.4892 |
0.6697 |
| D0LVJ9 | CE4 | 2 | 283 | 114 | 330 | 0.4786 |
0.7256 |
| A0A250JA96 | CBM8 , CE0 | 1 | 299 | 29 | 292 | 0.4602 |
0.7012 |
| A0A5C1Q9L7 | GH57 | 2 | 313 | 1 | 451 | 0.4595 |
0.6347 |
| E1R6M3 | GH57 | 2 | 313 | 1 | 452 | 0.4588 |
0.6349 |
| F5YDM6 | GH57 | 2 | 298 | 1 | 259 | 0.4569 |
0.7142 |
| A0A0C1V309 | GH57 | 8 | 314 | 4 | 460 | 0.4561 |
0.6417 |
| F8F2N4 | GH57 | 2 | 298 | 1 | 267 | 0.4554 |
0.7008 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3rxz-assembly1.cif.gz_B | 1 | 295 | 6 | 284 | 0.621 |
0.6864 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.