PROTEIN: HRGMv2_4372_20_25
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Protein File & Metadata
Source:
HRGMv2_4372_20_25.pdb
Genome ID:
Protein ID:
HRGMv2_4372_20_25
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Protein Sequence
MIGIIYIGQI ELSPFVKKYT AVMREEGVPY EIVHWNRSGV PMPDDDRHYT FSEQLDRYGR 60 LLGKILPFFK FRRFALDIIK KRKYEKLIIL TTQTAVVLPG ILRGKYRNQY FFDYRDTSYE 120 YIKPYKKFVD GIIERSAFTA ISSPGFREYL TDKKELIVAH NFQDEYYHQR ALQCRKNQTG 180 KIVIGYIGYL REYDYLIQFV QHFGMDERFE FHIHGSGDCL EQLKQFAEQY PNVQVFGAYD 240 EKDKMKIVDS FDMICYNYPY SFVNFPAVAN KFYDGIIRKK PMFGNLNTFS GKLIRDNGLG 300 ISLAEDEEDI TDRIYEYYQA FDETEFEKNC EHVLQKVMEE DQYYTDKIRE FVKG 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K0-F1-model_v4 | 1 | 354 | 2 | 369 | 0.8109 |
0.85 |
| AF-A0A0H3GSH7-F1-model_v4 | 1 | 354 | 6 | 380 | 0.783 |
0.8325 |
| AF-Q5F602-F1-model_v4 | 1 | 353 | 1 | 376 | 0.7781 |
0.8263 |
| AF-Q5FAE0-F1-model_v4 | 1 | 354 | 2 | 388 | 0.778 |
0.8339 |
| AF-Q58577-F1-model_v4 | 1 | 354 | 4 | 350 | 0.777 |
0.812 |
| AF-Q5FAD9-F1-model_v4 | 1 | 354 | 2 | 354 | 0.7712 |
0.7984 |
| AF-Q9I3V9-F1-model_v4 | 1 | 351 | 4 | 374 | 0.7703 |
0.82 |
| AF-O05083-F1-model_v4 | 1 | 352 | 3 | 353 | 0.7647 |
0.7941 |
| AF-K0EX89-F1-model_v4 | 1 | 354 | 2 | 365 | 0.7637 |
0.8005 |
| AF-G3XD85-F1-model_v4 | 1 | 354 | 3 | 368 | 0.7599 |
0.8043 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2S0M927-F1-model_v4 | GT4 | 1 | 354 | 2 | 362 | 0.9298 |
0.9512 |
| AF-A0A679HC30-F1-model_v4 | GT0 | 1 | 354 | 2 | 362 | 0.9227 |
0.9467 |
| AF-A0A1P8JE08-F1-model_v4 | GT0 | 1 | 354 | 2 | 353 | 0.922 |
0.9384 |
| AF-A0A7Z2NJM5-F1-model_v4 | GT0 | 1 | 354 | 2 | 350 | 0.92 |
0.9394 |
| A0A9E8VVQ4 | GT4 | 1 | 354 | 3 | 359 | 0.9196 |
0.941 |
| A0A642KMN4 | GT4 | 1 | 354 | 3 | 361 | 0.8782 |
0.9077 |
| USU03403.1 | GT0 | 1 | 354 | 1 | 367 | 0.8688 |
0.909 |
| A0A5M6AI14 | GT4 | 1 | 354 | 6 | 368 | 0.8632 |
0.8993 |
| U1ZIV4 | GT0 | 1 | 354 | 1 | 366 | 0.8598 |
0.8969 |
| A0A975H8Y5 | GT0 | 32 | 354 | 1 | 316 | 0.8589 |
0.9317 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S0M927 | GT4 | 1 | 354 | 2 | 362 | 0.9298 |
0.9512 |
| UQK46245.1 | GT4 | 1 | 353 | 3 | 363 | 0.9288 |
0.9548 |
| AYE52411.1 | GT4 | 1 | 353 | 2 | 357 | 0.9231 |
0.9421 |
| A0A9E8VVQ4 | GT4 | 1 | 354 | 3 | 359 | 0.9196 |
0.941 |
| A0A642KMN4 | GT4 | 1 | 354 | 3 | 361 | 0.8782 |
0.9077 |
| A0A0D8IDG1 | GT4 | 1 | 354 | 3 | 358 | 0.8682 |
0.8917 |
| A0A975KH74 | GT4 | 1 | 354 | 1 | 365 | 0.8663 |
0.8994 |
| A0A088T3C5 | GT4 | 32 | 354 | 1 | 319 | 0.865 |
0.9264 |
| A0A3A9VVF1 | GT4 | 1 | 354 | 6 | 361 | 0.8641 |
0.8905 |
| A0A5M6AI14 | GT4 | 1 | 354 | 6 | 368 | 0.8632 |
0.8993 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8b5s-assembly1.cif.gz_A | 1 | 354 | 2 | 363 | 0.7524 |
0.783 |
| 6kih-assembly2.cif.gz_B | 1 | 354 | 3 | 398 | 0.7517 |
0.8167 |
| 8b62-assembly2.cif.gz_B | 1 | 354 | 2 | 362 | 0.7476 |
0.7779 |
| 5zes-assembly1.cif.gz_A | 1 | 354 | 4 | 352 | 0.7443 |
0.7802 |
| 8b63-assembly1.cif.gz_A | 1 | 354 | 2 | 365 | 0.7429 |
0.7764 |
| 6ejj-assembly1.cif.gz_A | 1 | 354 | 3 | 358 | 0.7369 |
0.7708 |
| 5ze7-assembly1.cif.gz_B | 1 | 354 | 4 | 353 | 0.7368 |
0.7719 |
| 5ze7-assembly1.cif.gz_A | 1 | 354 | 4 | 349 | 0.7367 |
0.7761 |
| 2iw1-assembly1.cif.gz_A | 1 | 354 | 1 | 370 | 0.7355 |
0.7737 |
| 3c4q-assembly2.cif.gz_B | 1 | 354 | 2 | 390 | 0.7338 |
0.794 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P33694-F1-model_v4 | 1 | 354 | 3 | 380 | 0.7782 |
0.8482 |
| AF-Q8KIU8-F1-model_v4 | 1 | 354 | 3 | 396 | 0.7772 |
0.8447 |
| AF-Q58577-F1-model_v4 | 1 | 354 | 4 | 350 | 0.777 |
0.812 |
| AF-P0DMP7-F1-model_v4 | 1 | 354 | 2 | 338 | 0.7709 |
0.815 |
| AF-P0DMP6-F1-model_v4 | 1 | 354 | 2 | 338 | 0.77 |
0.8142 |
| AF-O05083-F1-model_v4 | 1 | 352 | 3 | 353 | 0.7647 |
0.7941 |
| AF-Q0P9C7-F1-model_v4 | 1 | 354 | 3 | 365 | 0.7532 |
0.7885 |
| AF-Q4JAK2-F1-model_v4 | 1 | 354 | 3 | 352 | 0.7515 |
0.7805 |
| AF-Q0P9C5-F1-model_v4 | 1 | 354 | 3 | 357 | 0.7447 |
0.7763 |
| AF-O32272-F1-model_v4 | 1 | 354 | 2 | 385 | 0.7438 |
0.8 |