Cluster: HRGMv2_4317_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4317_178 | HRGMv2_4317_178_1 | 40 | 2454 | - | GH94 |
| TF | HRGMv2_4317_178 | HRGMv2_4317_178_2 | 2791 | 3828 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_4317_178 | HRGMv2_4317_178_3 | 3842 | 5284 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4317_178 | HRGMv2_4317_178_4 | 5403 | 6299 | + | 3.A.1.1.4 |
Gene ID: HRGMv2_4317_178_1
Type: CAZyme
Location: 40 - 2454 (-)
Type: CAZyme
Location: 40 - 2454 (-)
Gene ID: HRGMv2_4317_178_2
Type: TF
Location: 2791 - 3828 (+)
Type: TF
Location: 2791 - 3828 (+)
Gene ID: HRGMv2_4317_178_3
Type:
Location: 3842 - 5284 (+)
Type:
Location: 3842 - 5284 (+)
Gene ID: HRGMv2_4317_178_4
Type: TC
Location: 5403 - 6299 (+)
Type: TC
Location: 5403 - 6299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus sp017889125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.