PROTEIN: HRGMv2_4317_178_3
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Protein File & Metadata
Source:
HRGMv2_4317_178_3.pdb
Genome ID:
Protein ID:
HRGMv2_4317_178_3
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Protein Sequence
MKKKLASVML CTAMSMSMLA GCGGSGGSET AANTETEAAG TEAKSEAESE AETEAAGEDT 60 ESEAAGTEGQ GQVFNIYCWN EEFKTRITDH YADYEKVDAT TGKIGDITVK WNITPNDDNA 120 YQNNLDATLL KQADASADDR IDMFLVEADY ALKYIDSEYT MAVADLGITD ADLSKQYQYT 180 KDVVTDSAGV LKGVSWQGCP GVLFYNREAA KEVFGTDDPA EVQEYVKDWD TFNETAAVLK 240 EAGYSIMSTV NDSYRVYSNN VTSPWVVDGK INIDENIMKW VDDSKELVDA GETNTYELWS 300 DDWSKGFYPE GKVFCYFGPA WLVNFSMAAD TEGSIGYQGG WGATEGPQGF FWGGTWICAA 360 EGTDNAELIK DIMLTMTTDD AVMKEIVVDD DDFVNNQDVM NAMAEDTGYA STILGGQNPL 420 GIYCAGVETL DLSNLSPYDQ GCNEEFQNAM KNYFEGNATK EEALDLFYKA VVEKYPELSY 480
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 5 | 478 | 254 | 866 | 0.5373 |
0.7037 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2TKJ3 | GH49 | 2 | 479 | 3 | 797 | 0.5543 |
0.7003 |
| A0A9Q8PNJ5 | GH4 | 5 | 478 | 254 | 866 | 0.5373 |
0.7037 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 67 | 476 | 1 | 393 | 0.7877 |
0.8794 |
| 8bfy-assembly1.cif.gz_A | 67 | 477 | 1 | 393 | 0.7479 |
0.8386 |
| 3uor-assembly2.cif.gz_B | 67 | 479 | 1 | 388 | 0.7343 |
0.8339 |
| 7vfq-assembly1.cif.gz_A | 67 | 480 | 1 | 394 | 0.7315 |
0.8193 |
| 6x84-assembly2.cif.gz_B | 66 | 479 | 1 | 411 | 0.7307 |
0.8051 |
| 7c0k-assembly1.cif.gz_A | 70 | 478 | 14 | 396 | 0.7306 |
0.8401 |
| 7vfq-assembly2.cif.gz_B | 67 | 480 | 1 | 396 | 0.7305 |
0.8163 |
| 7c0x-assembly2.cif.gz_B | 70 | 478 | 13 | 395 | 0.7303 |
0.8387 |
| 7vfr-assembly1.cif.gz_A | 67 | 480 | 1 | 397 | 0.7294 |
0.8141 |
| 7c0t-assembly2.cif.gz_B | 70 | 478 | 14 | 396 | 0.7289 |
0.8382 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 67 | 477 | 24 | 422 | 0.7397 |
0.8434 |
| AF-O31518-F1-model_v4 | 63 | 478 | 27 | 427 | 0.67 |
0.7698 |
| AF-P58300-F1-model_v4 | 45 | 478 | 9 | 434 | 0.6604 |
0.7252 |
| AF-Q9V297-F1-model_v4 | 37 | 478 | 3 | 453 | 0.6387 |
0.6911 |
| AF-D4GP35-F1-model_v4 | 63 | 480 | 62 | 459 | 0.635 |
0.7583 |