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Cluster: HRGMv2_4313_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4313_11 HRGMv2_4313_11_31 27610 29049 - 9.B.10.1.1
TC HRGMv2_4313_11 HRGMv2_4313_11_32 29210 30610 + 9.B.18.1.3
CAZyme HRGMv2_4313_11 HRGMv2_4313_11_33 30550 31365 + GT2
TC HRGMv2_4313_11 HRGMv2_4313_11_34 31458 32258 + 3.A.1.104.1
TC HRGMv2_4313_11 HRGMv2_4313_11_35 32315 33622 + 3.A.1.103.6
pfam HRGMv2_4313_11 HRGMv2_4313_11_36 33636 34559 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
NULL(UNKNOWN) HRGMv2_4313_11 HRGMv2_4313_11_37 34563 35837 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4313_11 HRGMv2_4313_11_38 35834 36814 + GT2
CAZyme HRGMv2_4313_11 HRGMv2_4313_11_39 36847 38085 + GT4
NULL(UNKNOWN) HRGMv2_4313_11 HRGMv2_4313_11_40 38066 39526 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4313_11 HRGMv2_4313_11_41 39542 41746 + GT4
pfam HRGMv2_4313_11 HRGMv2_4313_11_42 41884 42333 + EamA
TC HRGMv2_4313_11 HRGMv2_4313_11_43 42308 42667 + 2.A.7.33.5
STP HRGMv2_4313_11 HRGMv2_4313_11_44 42675 43811 + Aminotran_1_2
CAZyme HRGMv2_4313_11 HRGMv2_4313_11_45 43834 44397 + GT2
Gene ID: HRGMv2_4313_11_31
Type: TC
Location: 27610 - 29049 (-)
Gene ID: HRGMv2_4313_11_32
Type: TC
Location: 29210 - 30610 (+)
Gene ID: HRGMv2_4313_11_33
Type: CAZyme
Location: 30550 - 31365 (+)
Gene ID: HRGMv2_4313_11_34
Type: TC
Location: 31458 - 32258 (+)
Gene ID: HRGMv2_4313_11_35
Type: TC
Location: 32315 - 33622 (+)
Gene ID: HRGMv2_4313_11_36
Type: pfam
Location: 33636 - 34559 (+)
Gene ID: HRGMv2_4313_11_37
Type:
Location: 34563 - 35837 (+)
Gene ID: HRGMv2_4313_11_38
Type: CAZyme
Location: 35834 - 36814 (+)
Gene ID: HRGMv2_4313_11_39
Type: CAZyme
Location: 36847 - 38085 (+)
Gene ID: HRGMv2_4313_11_40
Type:
Location: 38066 - 39526 (+)
Gene ID: HRGMv2_4313_11_41
Type: CAZyme
Location: 39542 - 41746 (+)
Gene ID: HRGMv2_4313_11_42
Type: pfam
Location: 41884 - 42333 (+)
Gene ID: HRGMv2_4313_11_43
Type: TC
Location: 42308 - 42667 (+)
Gene ID: HRGMv2_4313_11_44
Type: STP
Location: 42675 - 43811 (+)
Gene ID: HRGMv2_4313_11_45
Type: CAZyme
Location: 43834 - 44397 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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