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PROTEIN: HRGMv2_4313_11_40

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4313_11_40.pdb
Genome ID:
HRGMv2_4313
Protein ID:
HRGMv2_4313_11_40

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKNVFHKWSE   SNKRPWDGER   KFQAAFMGLM   FIFLFAWAVV   QPFNFSPDEE   MRYKVVSYIF 60
RHNALPHGGD   PEVLDASWGI   SYAFYPVLSY   LVSYIFMKLV   SIFTMDSFAL   VVAARMAEVA 120
FGMGTAYFTM   KIGKKLFKGA   YQKMFLFLTM   LLPGAFVLFT   YINCDSLALL   ATAMMIYSWL 180
LGLEDGWSYK   TCVLTAVGVS   ACALAYYNAY   GSILATVAVF   VLSFLFCGEK   RWQIKKMFQR 240
GLFITAIVAV   LAGWWFARSY   VLYDGDILGL   DITTEYAEKY   ASEARKPSNG   YTFQQNPNVN 300
VFDMMMYQPV   NHAHNWIMMV   YYSFIGSFGY   MTIWPPEWIG   KLFMMVFLVG   IIGVVTRLRQ 360
LFAVRSIAFV   EKKQVEGTRL   RVKYTYRRRS   WSKEAVFHWG   LVIALVLPNL   LNIYNSYVND 420
YQPQGRYSMP   MIIPFMYFIT   KGYSFLFERV   RGGERIGRII   CGVVCAGMTV   FLLYCYFGLV 480
LPACLD 486
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EYW2-F1-model_v4 1 486 12 489 0.6866 0.7261
AF-Q9CD61-F1-model_v4 1 486 5 497 0.6783 0.7119
AF-X8F0H0-F1-model_v4 1 486 23 504 0.6709 0.7135
AF-Q9HUZ2-F1-model_v4 17 486 4 382 0.6352 0.8097
AF-Q8ZP99-F1-model_v4 5 486 5 498 0.6157 0.6559
AF-C1GUK5-F1-model_v4 9 486 23 553 0.6025 0.6867
AF-C0NL52-F1-model_v4 7 486 25 557 0.5995 0.6829
AF-A0A175VYA5-F1-model_v4 8 486 30 571 0.5952 0.6843
AF-Q9CC27-F1-model_v4 2 486 14 518 0.5924 0.6325
AF-K0F1P6-F1-model_v4 2 486 10 480 0.5881 0.6357
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q605T5-F1-model_v4 GT39 1 486 6 432 0.7122 0.7924
Q605T5 GT39 1 486 6 432 0.7122 0.7924
AF-A0A858Q705-F1-model_v4 GT39 1 486 5 432 0.7071 0.7849
AF-A0A0G3XG27-F1-model_v4 GT39 5 486 7 413 0.703 0.7971
AF-W0AAL2-F1-model_v4 GT39 16 486 13 407 0.6991 0.8093
AF-A0A7S7TT57-F1-model_v4 GT39 2 486 1 420 0.6948 0.7735
AF-A0A1M5GVD1-F1-model_v4 GT39 5 486 4 417 0.694 0.7803
AF-A0A6G6YWR9-F1-model_v4 GT39 5 486 7 420 0.6904 0.7787
AF-A0A1M6ZGC2-F1-model_v4 GT39 1 486 9 425 0.6901 0.7777
AF-A0A7U3TE86-F1-model_v4 GT39 6 486 7 421 0.6896 0.7764
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1S6H5E4 GT39 13 486 1 399 0.7278 0.8268
A5GCG9 GT39 4 486 3 414 0.7148 0.7911
D1CEC5 GT39 4 486 9 428 0.7124 0.7989
Q605T5 GT39 1 486 6 432 0.7122 0.7924
A0A0G3XG27 GT39 5 486 7 413 0.703 0.7971
W0AAL2 GT39 16 486 13 407 0.6991 0.8093
A0A6F9WZW7 GT39 1 486 1 419 0.699 0.7728
C6XQ09 GT39 1 486 1 418 0.6978 0.7778
A0A0B5BD88 GT39 16 486 1 401 0.6949 0.8058
K4KGJ7 GT39 16 486 25 466 0.6852 0.7631
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7zli-assembly1.cif.gz_A 9 486 1 512 0.5595 0.6653
3wak-assembly1.cif.gz_A 11 486 1 699 0.5091 0.6682
7e9s-assembly1.cif.gz_A 12 486 1 698 0.5043 0.6638
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8NRZ6-F1-model_v4 1 486 10 507 0.6773 0.7166
AF-P9WN04-F1-model_v4 1 486 27 509 0.6722 0.7165
AF-Q1MJ96-F1-model_v4 17 486 6 367 0.6144 0.8318
AF-Q1MJ94-F1-model_v4 17 486 6 368 0.6103 0.8227
AF-Q6BH65-F1-model_v4 1 486 8 529 0.5962 0.6462
AF-P42377-F1-model_v4 8 486 6 431 0.5893 0.7525
AF-A8FRR0-F1-model_v4 18 486 4 430 0.5837 0.7082
AF-F1Q8R9-F1-model_v4 1 486 55 737 0.5807 0.713
AF-Q9UKY4-F1-model_v4 6 486 44 731 0.5788 0.7152
AF-Q9NX78-F1-model_v4 1 486 7 571 0.5659 0.6775
Download Full SwissProt Results