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Cluster: HRGMv2_4312_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4312_9 HRGMv2_4312_9_18 23683 25020 - 9.B.18.1.1
NULL(UNKNOWN) HRGMv2_4312_9 HRGMv2_4312_9_19 25053 27077 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4312_9 HRGMv2_4312_9_20 27074 27853 - 3.A.1.103.1
pfam HRGMv2_4312_9 HRGMv2_4312_9_21 27901 28659 - ABC2_membrane
NULL(UNKNOWN) HRGMv2_4312_9 HRGMv2_4312_9_22 28656 29942 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4312_9 HRGMv2_4312_9_23 29896 30699 - GT2
CAZyme HRGMv2_4312_9 HRGMv2_4312_9_24 30659 31942 - GT4
pfam HRGMv2_4312_9 HRGMv2_4312_9_25 32240 32884 - Hydrolase_2
pfam HRGMv2_4312_9 HRGMv2_4312_9_26 33098 33727 + Hydrolase | HAD | HAD_2
TC HRGMv2_4312_9 HRGMv2_4312_9_27 33732 34658 - 2.A.69.4.3
Gene ID: HRGMv2_4312_9_18
Type: TC
Location: 23683 - 25020 (-)
Gene ID: HRGMv2_4312_9_19
Type:
Location: 25053 - 27077 (-)
Gene ID: HRGMv2_4312_9_20
Type: TC
Location: 27074 - 27853 (-)
Gene ID: HRGMv2_4312_9_21
Type: pfam
Location: 27901 - 28659 (-)
Gene ID: HRGMv2_4312_9_22
Type:
Location: 28656 - 29942 (-)
Gene ID: HRGMv2_4312_9_23
Type: CAZyme
Location: 29896 - 30699 (-)
Gene ID: HRGMv2_4312_9_24
Type: CAZyme
Location: 30659 - 31942 (-)
Gene ID: HRGMv2_4312_9_25
Type: pfam
Location: 32240 - 32884 (-)
Gene ID: HRGMv2_4312_9_26
Type: pfam
Location: 33098 - 33727 (+)
Gene ID: HRGMv2_4312_9_27
Type: TC
Location: 33732 - 34658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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