PROTEIN: HRGMv2_4312_9_19
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Protein File & Metadata
Source:
HRGMv2_4312_9_19.pdb
Genome ID:
Protein ID:
HRGMv2_4312_9_19
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Detailed structural information will appear here after analysis...
Protein Sequence
MKRTVRLGLY QLLVNRVPNI GEQYREMRKN YGGKKGRLLC WCALLFWNIR YYLLAGENGR 60 FSGRMYEKKK LKLQESAHPG RIAKQELEKK IAASDVVSFD VFDTLIVRPF SDPTDLFYLI 120 GMYFSCPDFR LFRIEAEQKA RYKKKNGAEV TLGEIWYELE NMTGIPAKEG ILIEKEVEQK 180 YCFANPYFVG LPEKIKEAGK KVIVISDMYL DQKFLLNLLV QQGFGMVDVC FVSAEYGGTK 240 ADGTLYEIVR RKMEEMEDRS SLRFLHIGDN RHSDIDMAKR AGWDTFWYPN VQEQGRRYRP 300 RDMSVMTGSM YRGLVNIRLH SGNCTYSPFY EYGYIYGGIL ALGYCQFIHA FVKENKIDGV 360 WFLARDGEIL KKIYERLYPD EKTFYVLWSR GAAARLLSSV WKEDFFERFL FQKMGQGYSM 420 KDIFKGMELE HLLSEACEIL NCRGDTVLSN SLAVKCKEFL LNQWEKVECS YHEEKEAARI 480 YLTDLAKRQK RIVVVDVGWA GSGAMGISYL LQEEFRLPCT VYGLLAGTNT CHNIRPDTAE 540 SFLFGKIIAS YVFSQVKNRD LWKFHDLNQK HNLYVELLFT SVTPTLKGFG LDEKGTPYFR 600 YGKKEAHREQ ILRIQKGILD FVEDYSKYFP AFLTGQTGRI EGRDAYAPLL LFLQDKKVRK 660 SLECLFEWDT SENA 674
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 105 | 674 | 1 | 611 | 0.717 |
0.829 |
| AF-Q0P8I2-F1-model_v4 | 72 | 674 | 54 | 870 | 0.5172 |
0.6962 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WII09730.1 | GT111 | 1 | 674 | 153 | 934 | 0.6471 |
0.7605 |
| A0A975E9I4 | GT2 | 29 | 674 | 196 | 996 | 0.6337 |
0.7938 |
| WAJ24550.1 | GT2 | 73 | 674 | 136 | 948 | 0.6306 |
0.8495 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 50 | 674 | 148 | 1005 | 0.6273 |
0.8134 |
| A0A974WXG9 | GT4 | 32 | 674 | 151 | 1048 | 0.6269 |
0.816 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 72 | 674 | 134 | 951 | 0.621 |
0.8389 |
| U5MZQ8 | GT2 | 72 | 674 | 134 | 951 | 0.621 |
0.8389 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 72 | 674 | 134 | 952 | 0.6159 |
0.8311 |
| UKD35065.1 | GT111 | 73 | 674 | 100 | 832 | 0.6031 |
0.787 |
| A0A0U3BMS4 | GT111 | 70 | 674 | 130 | 852 | 0.6005 |
0.7875 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WII09730.1 | GT111 | 1 | 674 | 153 | 934 | 0.6471 |
0.7605 |
| A0A975E9I4 | GT2 | 29 | 674 | 196 | 996 | 0.6337 |
0.7938 |
| WAJ24550.1 | GT2 | 73 | 674 | 136 | 948 | 0.6306 |
0.8495 |
| A0A078BDS9 | GT2 | 50 | 674 | 148 | 1005 | 0.6273 |
0.8134 |
| A0A974WXG9 | GT4 | 32 | 674 | 151 | 1048 | 0.6269 |
0.816 |
| U5MZQ8 | GT2 | 72 | 674 | 134 | 951 | 0.621 |
0.8389 |
| UKD35065.1 | GT111 | 73 | 674 | 100 | 832 | 0.6031 |
0.787 |
| A0A0U3BMS4 | GT111 | 70 | 674 | 130 | 852 | 0.6005 |
0.7875 |
| A0A1H2DMX7 | GT2 | 1 | 674 | 3 | 1529 | 0.5838 |
0.8113 |
| D5MIK3 | GT4 | 14 | 674 | 146 | 1457 | 0.5792 |
0.8078 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 93 | 674 | 242 | 845 | 0.5838 |
0.7913 |
| 8a0m-assembly2.cif.gz_D | 93 | 674 | 271 | 856 | 0.5643 |
0.768 |
| 8a0m-assembly2.cif.gz_C | 93 | 674 | 376 | 990 | 0.5561 |
0.7949 |
| 8a0c-assembly1.cif.gz_A | 93 | 674 | 380 | 994 | 0.5559 |
0.7956 |
| 8a0m-assembly1.cif.gz_A | 93 | 674 | 375 | 989 | 0.5556 |
0.7938 |
| 8a0c-assembly1.cif.gz_B | 93 | 674 | 380 | 991 | 0.5535 |
0.7907 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.