PROTEIN: HRGMv2_4312_9_22
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Protein File & Metadata
Source:
HRGMv2_4312_9_22.pdb
Genome ID:
Protein ID:
HRGMv2_4312_9_22
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Protein Sequence
MRTSYTHAEI ISRDSEAILA PAFVEFVKWV LKSAGEHNIR RIYFLARDGY PMYRAAQILC 60 QGRKPEIECR YLRCSRYAFR IPAFHLMGKE SVEQICLGGI DVTLEKVLRR GALTDEEIRE 120 IAKLLGKYEE MDRVLSYGEI QKLKRELLDM DRFWEYVNVH AREAYDAAIG YLKMEGLMDA 180 VRWAVADSGW TGSMQMSLRL LLESAGYRGR LTGYYFGLYH IPEGEKKENY HAYYFEPFGK 240 IKRKVNFSNS LFECMFSEAE HMTLAYRKNA FGYEPVKEKG EVENREALEM ITDAVEKEAK 300 KEAGQLPIRL HEWLLPCPDD VQRNMAMLMS RPSQEQAQAF GNLWFNDDVR GESRKVAAPL 360 TEEEIRNNQI ILRGAAMTGI RKEPVKESAW MEGSIVLGGK QVRWHLWQNR IYKYILNIKK 420 QIMEKRKK 428
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 7 | 407 | 239 | 631 | 0.6538 |
0.8509 |
| AF-Q0P8I2-F1-model_v4 | 3 | 418 | 6 | 976 | 0.4584 |
0.6674 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 3 | 415 | 4 | 403 | 0.5725 |
0.7519 |
| AF-W0DNV7-F1-model_v4 | GT2 | 8 | 423 | 672 | 1091 | 0.5705 |
0.8447 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 8 | 422 | 652 | 1067 | 0.5702 |
0.8408 |
| A0A1I7GMF6 | GT2 | 5 | 418 | 668 | 1083 | 0.569 |
0.8446 |
| A0A9J7AXY3 | GT2 | 3 | 418 | 3 | 399 | 0.5593 |
0.7727 |
| V4JBH5 | GT2 | 5 | 416 | 1 | 396 | 0.5547 |
0.7776 |
| A0A974WXG9 | GT4 | 1 | 412 | 190 | 1078 | 0.5527 |
0.8278 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 5 | 415 | 8 | 405 | 0.5427 |
0.7675 |
| AF-W8KPG0-F1-model_v4 | GT2 | 5 | 416 | 6 | 398 | 0.5277 |
0.764 |
| QRK05458.1 | GT4 | 3 | 425 | 266 | 988 | 0.5253 |
0.783 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 3 | 415 | 4 | 403 | 0.5725 |
0.7519 |
| A0A2I6S8V6 | GT2 | 8 | 422 | 652 | 1067 | 0.5702 |
0.8408 |
| A0A1I7GMF6 | GT2 | 5 | 418 | 668 | 1083 | 0.569 |
0.8446 |
| A0A9J7AXY3 | GT2 | 3 | 418 | 3 | 399 | 0.5593 |
0.7727 |
| V4JBH5 | GT2 | 5 | 416 | 1 | 396 | 0.5547 |
0.7776 |
| A0A974WXG9 | GT4 | 1 | 412 | 190 | 1078 | 0.5527 |
0.8278 |
| A0A0H3KC95 | GT2 | 5 | 415 | 8 | 405 | 0.5427 |
0.7675 |
| W8KPG0 | GT2 | 5 | 416 | 6 | 398 | 0.5277 |
0.764 |
| QRK05458.1 | GT4 | 3 | 425 | 266 | 988 | 0.5253 |
0.783 |
| A6M2M4 | GT2 | 3 | 426 | 214 | 917 | 0.5172 |
0.7973 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 9 | 343 | 253 | 591 | 0.5646 |
0.8292 |
| 8a0m-assembly1.cif.gz_B | 1 | 411 | 494 | 876 | 0.5309 |
0.8173 |
| 8a0m-assembly2.cif.gz_C | 1 | 411 | 628 | 1024 | 0.5301 |
0.823 |
| 8a0m-assembly1.cif.gz_A | 1 | 411 | 627 | 1023 | 0.5296 |
0.822 |
| 8a0c-assembly1.cif.gz_A | 1 | 411 | 632 | 1028 | 0.5285 |
0.8213 |
| 8a0c-assembly1.cif.gz_B | 3 | 411 | 636 | 1025 | 0.519 |
0.8193 |
| 8a0m-assembly2.cif.gz_D | 1 | 411 | 523 | 887 | 0.4989 |
0.8047 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.