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Cluster: HRGMv2_4201_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4201_21 HRGMv2_4201_21_19 21273 22823 - GT2
NULL(UNKNOWN) HRGMv2_4201_21 HRGMv2_4201_21_20 22861 23031 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4201_21 HRGMv2_4201_21_21 23046 24356 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4201_21 HRGMv2_4201_21_22 24350 25831 - GT4
TC HRGMv2_4201_21 HRGMv2_4201_21_23 25848 28157 - 3.A.5.10.1
pfam HRGMv2_4201_21 HRGMv2_4201_21_24 28163 28591 - Sec-ASP3
TC HRGMv2_4201_21 HRGMv2_4201_21_25 28581 30095 - 3.A.5.10.1
TC HRGMv2_4201_21 HRGMv2_4201_21_26 30082 31665 - 3.A.5.10.1
TC HRGMv2_4201_21 HRGMv2_4201_21_27 31678 32862 - 3.A.5.2.1
Gene ID: HRGMv2_4201_21_19
Type: CAZyme
Location: 21273 - 22823 (-)
Gene ID: HRGMv2_4201_21_20
Type:
Location: 22861 - 23031 (-)
Gene ID: HRGMv2_4201_21_21
Type:
Location: 23046 - 24356 (-)
Gene ID: HRGMv2_4201_21_22
Type: CAZyme
Location: 24350 - 25831 (-)
Gene ID: HRGMv2_4201_21_23
Type: TC
Location: 25848 - 28157 (-)
Gene ID: HRGMv2_4201_21_24
Type: pfam
Location: 28163 - 28591 (-)
Gene ID: HRGMv2_4201_21_25
Type: TC
Location: 28581 - 30095 (-)
Gene ID: HRGMv2_4201_21_26
Type: TC
Location: 30082 - 31665 (-)
Gene ID: HRGMv2_4201_21_27
Type: TC
Location: 31678 - 32862 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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