PROTEIN: HRGMv2_4201_21_21
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Protein File & Metadata
Source:
HRGMv2_4201_21_21.pdb
Genome ID:
Protein ID:
HRGMv2_4201_21_21
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Protein Sequence
MLEMPVLLLD NFNEESQMLY QSLKDSGFQG KIVTLSDDGF LPEDVISIYT YYCGKKEGGK 60 PAYFNQIDVP DYWEIKASNT GGQVFDLNHE RAKIFFSTPL HKRLVRVVDW YDDTHVVRCS 120 EHYNQYGFVY ARTLFNKQGQ LVSRSYYDES GIEKVVENFV THDIILNQED QVYFFKDKVQ 180 FTLHLFEELQ IKPTRLFYNS LSYPFFVSES LEEGLHQDVL FWQEGYREDI PGNMQVILNG 240 QSRRTSHIYV QKKESFEKLV SLGANTDVLR PLGFLYSFKK ENQHSNQVLI CTNSDHIEKL 300 NELIQALPNM KFHIAALTEM SSKLMNFDRY ENVRLYPGAK VAEIDKLFDT CDYYLDINYE 360 NEIVDATKQA FLHNMLILSF NQTLHNAKHV LPNMIFDAND YVKMVEKIQD ASHLDIYIQA 420 QQAHAMSQSK EDYKNI 436
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 5 | 436 | 1 | 446 | 0.9346 |
0.9679 |
| AF-Q2FUW3-F1-model_v4 | 4 | 436 | 1 | 510 | 0.5568 |
0.6266 |
| AF-O05083-F1-model_v4 | 3 | 436 | 1 | 352 | 0.5466 |
0.6249 |
| AF-Q2G0L2-F1-model_v4 | 4 | 436 | 1 | 492 | 0.5409 |
0.6013 |
| AF-Q2G0L3-F1-model_v4 | 4 | 436 | 1 | 488 | 0.5404 |
0.5955 |
| AF-Q2FUW7-F1-model_v4 | 3 | 436 | 1 | 495 | 0.5331 |
0.5927 |
| AF-Q2G290-F1-model_v4 | 3 | 436 | 1 | 381 | 0.5231 |
0.5818 |
| AF-A0A0N4UFD9-F1-model_v4 | 3 | 436 | 1 | 396 | 0.5112 |
0.5598 |
| AF-Q2G255-F1-model_v4 | 3 | 436 | 1 | 367 | 0.5094 |
0.5809 |
| AF-Q9H553-F1-model_v4 | 3 | 436 | 15 | 411 | 0.503 |
0.5589 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A385XML0-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9625 |
0.9807 |
| AF-A0A1D7TQ49-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9591 |
0.9796 |
| AF-A0A1Y0FAB7-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.959 |
0.9795 |
| AF-A0A5P6VTZ8-F1-model_v4 | GT8 | 1 | 436 | 1 | 446 | 0.957 |
0.9746 |
| AF-A0A089QAW1-F1-model_v4 | GT8 | 3 | 436 | 1 | 441 | 0.9564 |
0.9753 |
| AF-A0A239X8E7-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9531 |
0.9736 |
| A0A380JYR0 | GT8 | 5 | 436 | 1 | 439 | 0.9506 |
0.9736 |
| AZZ60386.1 | GT8 | 5 | 436 | 1 | 441 | 0.95 |
0.9726 |
| A0A6L8MZD6 | GT8 | 5 | 436 | 1 | 436 | 0.95 |
0.9712 |
| AF-A0A4U9ZI27-F1-model_v4 | GT8 | 5 | 436 | 1 | 438 | 0.9498 |
0.9699 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P6VTZ8 | GT8 | 1 | 436 | 1 | 446 | 0.957 |
0.9746 |
| A0A089QAW1 | GT8 | 3 | 436 | 1 | 441 | 0.9564 |
0.9753 |
| A0A9P1S375 | GT8 | 5 | 436 | 1 | 441 | 0.9512 |
0.9734 |
| A0A380JYR0 | GT8 | 5 | 436 | 1 | 439 | 0.9506 |
0.9736 |
| AZZ60386.1 | GT8 | 5 | 436 | 1 | 441 | 0.95 |
0.9726 |
| A0A6L8MZD6 | GT8 | 5 | 436 | 1 | 436 | 0.95 |
0.9712 |
| SQG82531.1 | GT8 | 5 | 436 | 1 | 439 | 0.9493 |
0.9712 |
| A0A0R1V511 | GT8 | 5 | 436 | 1 | 443 | 0.9475 |
0.9721 |
| A0A428GIL4 | GT8 | 5 | 436 | 1 | 442 | 0.9469 |
0.97 |
| A0A3S6QT94 | GT8 | 5 | 436 | 1 | 438 | 0.9468 |
0.968 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 5 | 436 | 1 | 441 | 0.9093 |
0.9399 |
| 6oyc-assembly4.cif.gz_A | 4 | 436 | 1 | 494 | 0.6333 |
0.6997 |
| 5vae-assembly5.cif.gz_E | 4 | 436 | 1 | 502 | 0.6249 |
0.699 |
| 5vae-assembly5.cif.gz_G | 4 | 436 | 1 | 502 | 0.6245 |
0.6986 |
| 5vae-assembly1.cif.gz_A | 4 | 436 | 1 | 503 | 0.6211 |
0.6981 |
| 6lnw-assembly1.cif.gz_A | 4 | 436 | 1 | 484 | 0.62 |
0.6832 |
| 7ec7-assembly1.cif.gz_A | 4 | 436 | 1 | 492 | 0.5621 |
0.6242 |
| 7ec7-assembly2.cif.gz_B | 4 | 436 | 1 | 490 | 0.5536 |
0.6138 |
| 5vaf-assembly4.cif.gz_D | 4 | 436 | 1 | 504 | 0.5447 |
0.6093 |
| 4pqg-assembly1.cif.gz_A | 1 | 436 | 1 | 499 | 0.5416 |
0.6028 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q79T00-F1-model_v4 | 5 | 436 | 1 | 441 | 0.9432 |
0.9741 |
| AF-A0A0H2UR90-F1-model_v4 | 5 | 436 | 1 | 439 | 0.9418 |
0.968 |
| AF-A0A0S4NND9-F1-model_v4 | 5 | 436 | 1 | 434 | 0.8982 |
0.9251 |
| AF-Q3S2Y1-F1-model_v4 | 5 | 436 | 1 | 436 | 0.8951 |
0.9246 |
| AF-A1C3M0-F1-model_v4 | 5 | 436 | 1 | 434 | 0.8902 |
0.9175 |
| AF-Q9AET9-F1-model_v4 | 4 | 436 | 1 | 515 | 0.6121 |
0.6909 |
| AF-Q2FUW3-F1-model_v4 | 4 | 436 | 1 | 510 | 0.5568 |
0.6266 |
| AF-A0A0H2WWV6-F1-model_v4 | 2 | 436 | 1 | 487 | 0.5467 |
0.6028 |
| AF-O05083-F1-model_v4 | 3 | 436 | 1 | 352 | 0.5466 |
0.6249 |
| AF-A1C3L9-F1-model_v4 | 4 | 436 | 1 | 497 | 0.5381 |
0.6012 |