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Cluster: HRGMv2_4189_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4189_29 HRGMv2_4189_29_1 1 2424 + GT4
NULL(UNKNOWN) HRGMv2_4189_29 HRGMv2_4189_29_2 2542 3570 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4189_29 HRGMv2_4189_29_3 3557 4567 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4189_29 HRGMv2_4189_29_4 4569 5831 - 9.A.41.1.3
CAZyme HRGMv2_4189_29 HRGMv2_4189_29_5 5846 7861 - GT107 | GT107
TC HRGMv2_4189_29 HRGMv2_4189_29_6 7927 9600 - 1.B.18.1.2
TC HRGMv2_4189_29 HRGMv2_4189_29_7 9631 10671 - 8.A.4.1.1
TC HRGMv2_4189_29 HRGMv2_4189_29_8 11192 12859 - 3.A.1.120.6
CAZyme HRGMv2_4189_29 HRGMv2_4189_29_9 13082 15019 + GH23
Gene ID: HRGMv2_4189_29_1
Type: CAZyme
Location: 1 - 2424 (+)
Gene ID: HRGMv2_4189_29_2
Type:
Location: 2542 - 3570 (+)
Gene ID: HRGMv2_4189_29_3
Type:
Location: 3557 - 4567 (+)
Gene ID: HRGMv2_4189_29_4
Type: TC
Location: 4569 - 5831 (-)
Gene ID: HRGMv2_4189_29_5
Type: CAZyme
Location: 5846 - 7861 (-)
Gene ID: HRGMv2_4189_29_6
Type: TC
Location: 7927 - 9600 (-)
Gene ID: HRGMv2_4189_29_7
Type: TC
Location: 9631 - 10671 (-)
Gene ID: HRGMv2_4189_29_8
Type: TC
Location: 11192 - 12859 (-)
Gene ID: HRGMv2_4189_29_9
Type: CAZyme
Location: 13082 - 15019 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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